Gene detail information of Glyur000019s00002100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41430.5 | 1.00E-24 | dehydration-induced protein (ERD15) |
| NR | KEH23604.1 | 5.10E-55 | dehydration-induced protein ERD15 [Medicago truncatula] |
| Swissprot | tr|Q39096|ERD15_ARATH | 6.00E-30 | Protein EARLY RESPONSIVE TO DEHYDRATION 15 |
| trEMBL | tr|A0A072U1M5|A0A072U1M5_MEDTR | 2.00E-55 | Dehydration-induced protein ERD15 {ECO:0000313|EMBL:KEH23604.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 114736 | 116611 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.398 |
| SRR1783600 | control | 21.179 |
| SRR1783602 | moderate drought stress | 16.023 |
| SRR1811619 | moderate drought stress | 16.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 88.277 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 87.904 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.322 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.999 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 96.379 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.168 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 107.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 106.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 144.439 |
| SRR2868004 | Drought Stress (root) | 211.454 |
| SRR2967015 | Control (root) | 216.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 446.419 |
| SRR9715740 | Leaf | 248.022 |
| SRR9715741 | Leaf | 512.401 |
| SRR9715739 | Root | 66.389 |
| SRR9715742 | Root | 92.690 |
| SRR9715743 | Root | 88.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 106.502 |
| SRR8749028 | MeJA induced 9h | 98.311 |
| SRR8749029 | MeJA induced 9h | 126.741 |
| SRR8749030 | Uninduced | 110.809 |
| SRR8749031 | Uninduced | 119.976 |
| SRR8749032 | Uninduced | 237.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 130.865 |
| SRR8400027 | Control - Root | 143.564 |