Gene detail

Gene detail information of Glyur000018s00003757.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78590.1	3.00E-104	NAD(H) kinase 3
NR	XP_004488989.1	0	PREDICTED: NADH kinase-like [Cicer arietinum]
COG	YP_008156006.1	7.00E-31	hypothetical protein SCE1572_48320 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q500Y9\|NADHK_ARATH	4.00E-129	NADH kinase
trEMBL	tr\|A0A072VK73\|A0A072VK73_MEDTR	0	NAD/NADH kinase family protein {ECO:0000313\|EMBL:KEH38555.1}

Sequence

Transcript Sequence

>Glyur000018s00003757.1
CTCTTCGGAATTCAATTGCCAATTGCAAACACATTGAGTTTGAGGAGAGTTGAAAGAAAGAAAATGGCGATGAAGAGACTGTTACTGCTGCTAAAACCCTTCACTGTATCTGCTTCACCTTCCCACACTCACCCTCAGATCTTACATTTCTTGAATAGTAGGCATAAGGTGCACCATGATGCCATAAACGTCTGTCAAACAATTGTGCGGAAAAAGTCAGTTGAATGGAAAGCTGTGATGCGAAATGATTTGAAACAGNCCATCAATGATGTGGACCTGGTTGTTGCAATTGGTGGTGATGGAACTCTTCTGCAGGCCAGCCATTTAATGGATGACAAAATTCCTGTTCTTGGAGTAAACTCTGATCCTACACGGATTGATGAGGTGGAACAATTCAGCAGTGAGTTTGATGCTACCAGAAGCACTGGTCATCTTTGTGCTGCAACTGTTGAAAACTTTGAACAGGTTTTAGATGGTATACTTGAGGGTCAAATTGTTCCTTCCAAGCTAACAAGGATAATGATATCTGTTAATGCACTTCAATTGTCAACTTATGCTCTCAATGATATCTTAGTTGCACATCCCTGTCCTGCTTCACTCTCTACGTTCTCCTTCAGAATCACAAAGGATGATCAGCCATGTTCCCCACTAGTTAACTGCAGATCAAGTGGTCTAAGAGTTTCAACAGCTGCTGGTTCAACAGCTGCAATGCATTCAGCAGGTGGATTTCNGATGCCCATTTTATCTCGGGATCTCCAGTACATGGTAAGGGAGCCTATTTCACCTGGGGCAGTGTCAAACTTCATGCATGGATTGATTAAGCATGACCGGACAATAAGCACTACATGGTCTTGTAGAAAAGGTGTGATATATATTGATGGTTCTCATATCAACTATACCATTCAAGAAGGGGACATCATTGAGATTTCTTCCAAAGCCCCTAGTCTGAAAGTTTTCTTGCCTCATCACTTGTTACAATTNGAAAAGGTATGAACTGAATTGGATTTCACAGCACACCATCATCAGGAGGATACACAAATTTGTTGGAGGATCTGTGTGTGCAATGAAAAAGTTTAGGCCACATGAGCTGACATGGCTTTTAAGCTTGCAATTTCCTATATCTTCTTAAGGGTTGAGCTACAAATACAATCCGGAGTCTTTTATGTACTGATATCCAAGCCCTAAATATGGAGCTGACTTGACTTTAAAATTGAGGAGGATAAAGTTTCTGATGTACGTATCACTCATAAGCTTCAACAGGGNGTATTTTGATAGATCAGTCTCCGTGGAGGGAATAGGGATCAAGAGTTTTGTTAGACCCCCTTTTCTTATTGATAAAAATAGGCCATTTTGAACAAGGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00018	575605	579054	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00858	ppnK, NADK	EC:2.7.1.23	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

biological_process

GO:0006741 NADP biosynthetic process

GO:0008152 metabolic process

GO:0019674 NAD metabolic process

molecular_function
GO:0003951 NAD+ kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000018s00003757.1	PF01513.16	NAD_kinase	51	99	2.50E-10
Glyur000018s00003757.1	PF01513.16	NAD_kinase	122	290	2.10E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.539
SRR1783600	control	4.496
SRR1783602	moderate drought stress	4.611
SRR1811619	moderate drought stress	4.396

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.027
DRR006520	Root Summer glycyrrhizin high producing strain	6.432
DRR006521	Root Winter glycyrrhizin high producing strain	7.790
DRR006522	Root Winter glycyrrhizin high producing strain	7.625
DRR006523	Root Summer glycyrrhizin low producing strain	3.180
DRR006524	Root Summer glycyrrhizin low producing strain	3.402
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.629
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.620

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.802
SRR2868004	Drought Stress (root)	2.666
SRR2967015	Control (root)	3.298

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.544
SRR9715740	Leaf	1.697
SRR9715741	Leaf	1.054
SRR9715739	Root	1.412
SRR9715742	Root	1.660
SRR9715743	Root	1.416

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.819
SRR8749028	MeJA induced 9h	6.339
SRR8749029	MeJA induced 9h	3.454
SRR8749030	Uninduced	2.804
SRR8749031	Uninduced	0.743
SRR8749032	Uninduced	0.656

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.289
SRR8400027	Control - Root	5.730