Gene detail information of Glyur000018s00003733.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78700.1 | 2.00E-91 | BES1/BZR1 homolog 4 |
| NR | XP_004489001.1 | 6.72E-175 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9ZV88|BEH4_ARATH | 5.00E-131 | BES1/BZR1 homolog protein 4 |
| trEMBL | tr|V7BWX4|V7BWX4_PHAVU | 8.00E-167 | Uncharacterized protein {ECO:0000313|EMBL:ESW21543.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 377084 | 394344 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | BES1 |
| EAR motif-containing Proteins | BES1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000018s00003733.1 | PF05687.8 | DUF822 | 3 | 149 | 2.20E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 73.654 |
| SRR1783600 | control | 71.284 |
| SRR1783602 | moderate drought stress | 65.490 |
| SRR1811619 | moderate drought stress | 60.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.091 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.232 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.254 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.885 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.195 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.570 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.492 |
| SRR2868004 | Drought Stress (root) | 60.052 |
| SRR2967015 | Control (root) | 67.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.397 |
| SRR9715740 | Leaf | 31.169 |
| SRR9715741 | Leaf | 45.656 |
| SRR9715739 | Root | 95.960 |
| SRR9715742 | Root | 102.926 |
| SRR9715743 | Root | 98.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.472 |
| SRR8749028 | MeJA induced 9h | 62.708 |
| SRR8749029 | MeJA induced 9h | 47.134 |
| SRR8749030 | Uninduced | 29.377 |
| SRR8749031 | Uninduced | 11.914 |
| SRR8749032 | Uninduced | 16.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.924 |
| SRR8400027 | Control - Root | 82.089 |