Gene detail information of Glyur000018s00003723 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53400.1 | 3.00E-33 | Ubiquitin domain-containing protein |
| NR | XP_003596315.1 | 5.33E-73 | Ubiquitin domain-containing protein [Medicago truncatula] |
| trEMBL | tr|G7ITE8|G7ITE8_MEDTR | 2.00E-73 | Uncharacterized protein {ECO:0000313|EMBL:AFK45238.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 275031 | 280478 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.436 |
| SRR1783600 | control | 9.611 |
| SRR1783602 | moderate drought stress | 16.772 |
| SRR1811619 | moderate drought stress | 16.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.674 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 123.609 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 120.406 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.666 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.040 |
| SRR2868004 | Drought Stress (root) | 31.841 |
| SRR2967015 | Control (root) | 30.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.898 |
| SRR9715740 | Leaf | 26.347 |
| SRR9715741 | Leaf | 25.626 |
| SRR9715739 | Root | 6.467 |
| SRR9715742 | Root | 9.732 |
| SRR9715743 | Root | 10.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.260 |
| SRR8749028 | MeJA induced 9h | 89.892 |
| SRR8749029 | MeJA induced 9h | 92.076 |
| SRR8749030 | Uninduced | 108.010 |
| SRR8749031 | Uninduced | 67.509 |
| SRR8749032 | Uninduced | 163.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.097 |
| SRR8400027 | Control - Root | 25.656 |