Gene detail information of Glyur000018s00003705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78810.2 | 7.00E-26 | |
| NR | XP_007149380.1 | 2.43E-101 | hypothetical protein PHAVU_005G065400g [Phaseolus vulgaris] |
| trEMBL | tr|V7BTU2|V7BTU2_PHAVU | 9.00E-102 | Uncharacterized protein {ECO:0000313|EMBL:ESW21374.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 163147 | 165582 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.783 |
| SRR1783600 | control | 10.601 |
| SRR1783602 | moderate drought stress | 8.507 |
| SRR1811619 | moderate drought stress | 8.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.627 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.676 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.244 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.462 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.160 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.902 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.294 |
| SRR2868004 | Drought Stress (root) | 18.574 |
| SRR2967015 | Control (root) | 20.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.182 |
| SRR9715740 | Leaf | 8.027 |
| SRR9715741 | Leaf | 7.722 |
| SRR9715739 | Root | 9.338 |
| SRR9715742 | Root | 12.920 |
| SRR9715743 | Root | 13.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.699 |
| SRR8749028 | MeJA induced 9h | 21.957 |
| SRR8749029 | MeJA induced 9h | 18.654 |
| SRR8749030 | Uninduced | 3.980 |
| SRR8749031 | Uninduced | 1.071 |
| SRR8749032 | Uninduced | 2.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.106 |
| SRR8400027 | Control - Root | 32.675 |