Gene detail information of Glyur000018s00003692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42590.2 | 3.00E-89 | general regulatory factor 9 |
| NR | XP_003596410.1 | 6.59E-149 | 14-3-3-like protein GF14 [Medicago truncatula] |
| Swissprot | tr|Q96453|1433D_SOYBN | 6.00E-133 | 14-3-3-like protein D |
| trEMBL | tr|G7IH96|G7IH96_MEDTR | 2.00E-149 | General regulatory factor 2 {ECO:0000313|EMBL:AES66661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 92715 | 96173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000018s00003692.1 | PF00244.15 | 2014/3/3 | 10 | 237 | 1.90E-97 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.013 |
| SRR1783600 | control | 19.653 |
| SRR1783602 | moderate drought stress | 19.147 |
| SRR1811619 | moderate drought stress | 18.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 78.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.953 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.888 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.283 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.979 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 64.472 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 63.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.753 |
| SRR2868004 | Drought Stress (root) | 45.731 |
| SRR2967015 | Control (root) | 36.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.003 |
| SRR9715740 | Leaf | 59.986 |
| SRR9715741 | Leaf | 65.984 |
| SRR9715739 | Root | 16.694 |
| SRR9715742 | Root | 23.427 |
| SRR9715743 | Root | 21.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.028 |
| SRR8749028 | MeJA induced 9h | 16.072 |
| SRR8749029 | MeJA induced 9h | 9.311 |
| SRR8749030 | Uninduced | 4.097 |
| SRR8749031 | Uninduced | 0.920 |
| SRR8749032 | Uninduced | 2.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.461 |
| SRR8400027 | Control - Root | 67.814 |