Gene detail information of Glyur000018s00003681 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53280.1 | 4.00E-160 | Class I glutamine amidotransferase-like superfamily protein |
| NR | XP_004489045.1 | 0 | PREDICTED: protein DJ-1 homolog B-like [Cicer arietinum] |
| COG | YP_006760414.1 | 4.00E-47 | DJ-1 family protein [Desulfobacula toluolica Tol2] |
| Swissprot | tr|Q9MAH3|DJ1B_ARATH | 0 | Protein DJ-1 homolog B (Precursor) |
| trEMBL | tr|A0A072V987|A0A072V987_MEDTR | 0 | Class I glutamine amidotransferase superfamily protein {ECO:0000313|EMBL:KEH38629.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 15654 | 18916 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000018s00003681.1 | PF01965.19 | DJ-1_PfpI | 90 | 217 | 2.30E-29 |
| Glyur000018s00003681.1 | PF01965.19 | DJ-1_PfpI | 285 | 421 | 2.10E-30 |
| Glyur000018s00003681.2 | PF01965.19 | DJ-1_PfpI | 90 | 169 | 2.60E-17 |
| Glyur000018s00003681.2 | PF01965.19 | DJ-1_PfpI | 262 | 398 | 1.80E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 77.518 |
| SRR1783600 | control | 77.286 |
| SRR1783602 | moderate drought stress | 107.183 |
| SRR1811619 | moderate drought stress | 105.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 91.989 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 89.805 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.057 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.150 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.373 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 73.697 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.845 |
| SRR2868004 | Drought Stress (root) | 38.224 |
| SRR2967015 | Control (root) | 37.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.060 |
| SRR9715740 | Leaf | 29.359 |
| SRR9715741 | Leaf | 30.714 |
| SRR9715739 | Root | 66.704 |
| SRR9715742 | Root | 86.580 |
| SRR9715743 | Root | 76.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.824 |
| SRR8749028 | MeJA induced 9h | 43.211 |
| SRR8749029 | MeJA induced 9h | 33.347 |
| SRR8749030 | Uninduced | 16.003 |
| SRR8749031 | Uninduced | 5.985 |
| SRR8749032 | Uninduced | 7.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 71.333 |
| SRR8400027 | Control - Root | 59.039 |