Gene detail information of Glyur000018s00003676 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15000.1 | 9.00E-68 | cobalt ion binding |
| NR | XP_007149407.1 | 2.16E-176 | hypothetical protein PHAVU_005G067700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LKA5|UMP1_ARATH | 9.00E-102 | Uncharacterized protein At3g15000, mitochondrial |
| trEMBL | tr|V7BXU9|V7BXU9_PHAVU | 8.00E-177 | Uncharacterized protein {ECO:0000313|EMBL:ESW21401.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 766 | 3007 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 129.530 |
| SRR1783600 | control | 128.545 |
| SRR1783602 | moderate drought stress | 143.743 |
| SRR1811619 | moderate drought stress | 140.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 154.331 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 153.156 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 126.217 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 126.964 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 184.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 185.962 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 102.610 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 100.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 124.619 |
| SRR2868004 | Drought Stress (root) | 91.715 |
| SRR2967015 | Control (root) | 105.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.777 |
| SRR9715740 | Leaf | 67.645 |
| SRR9715741 | Leaf | 51.943 |
| SRR9715739 | Root | 73.221 |
| SRR9715742 | Root | 87.660 |
| SRR9715743 | Root | 79.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 133.266 |
| SRR8749028 | MeJA induced 9h | 85.130 |
| SRR8749029 | MeJA induced 9h | 75.709 |
| SRR8749030 | Uninduced | 17.880 |
| SRR8749031 | Uninduced | 6.252 |
| SRR8749032 | Uninduced | 21.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 106.514 |
| SRR8400027 | Control - Root | 87.222 |