Gene detail information of Glyur000017s00002451 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18060.1 | 5.00E-26 | SAUR-like auxin-responsive protein family |
| NR | ACU16335.1 | 2.98E-45 | unknown [Glycine max] |
| Swissprot | tr|P33081|AX15A_SOYBN | 2.00E-34 | Auxin-induced protein 15A |
| trEMBL | tr|C6T3U7|C6T3U7_SOYBN | 1.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 506158 | 506406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000017s00002451.1 | PF02519.9 | Auxin_inducible | 12 | 79 | 2.50E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.716 |
| SRR1783600 | control | 1.053 |
| SRR1783602 | moderate drought stress | 3.552 |
| SRR1811619 | moderate drought stress | 2.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.169 |
| SRR2868004 | Drought Stress (root) | 0.425 |
| SRR2967015 | Control (root) | 1.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.780 |
| SRR9715740 | Leaf | 0.303 |
| SRR9715741 | Leaf | 0.975 |
| SRR9715739 | Root | 0.145 |
| SRR9715742 | Root | 0.187 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.287 |
| SRR8749032 | Uninduced | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.479 |
| SRR8400027 | Control - Root | 3.067 |