Gene detail information of Glyur000017s00002446 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01130.2 | 2.00E-11 | |
| NR | KHG22467.1 | 4.75E-20 | hypothetical protein F383_09277 [Gossypium arboreum] |
| trEMBL | tr|G7JL09|G7JL09_MEDTR | 7.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:AFK36005.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 464190 | 466567 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 76.668 |
| SRR1783600 | control | 77.099 |
| SRR1783602 | moderate drought stress | 42.798 |
| SRR1811619 | moderate drought stress | 41.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 120.095 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 118.399 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.663 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.487 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.356 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 62.797 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 208.540 |
| SRR2868004 | Drought Stress (root) | 136.757 |
| SRR2967015 | Control (root) | 114.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.600 |
| SRR9715740 | Leaf | 85.932 |
| SRR9715741 | Leaf | 87.910 |
| SRR9715739 | Root | 43.191 |
| SRR9715742 | Root | 61.235 |
| SRR9715743 | Root | 51.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 128.857 |
| SRR8749028 | MeJA induced 9h | 76.528 |
| SRR8749029 | MeJA induced 9h | 122.973 |
| SRR8749030 | Uninduced | 53.066 |
| SRR8749031 | Uninduced | 51.845 |
| SRR8749032 | Uninduced | 42.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 190.933 |
| SRR8400027 | Control - Root | 184.195 |