Gene detail information of Glyur000017s00002419 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51100.1 | 9.00E-28 | |
| NR | XP_004506406.1 | 2.83E-73 | PREDICTED: uncharacterized protein LOC101496565 [Cicer arietinum] |
| trEMBL | tr|C6TFI7|C6TFI7_SOYBN | 3.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G11920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 308211 | 311982 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 56.149 |
| SRR1783600 | control | 57.003 |
| SRR1783602 | moderate drought stress | 40.046 |
| SRR1811619 | moderate drought stress | 40.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.165 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.488 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.954 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.998 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.613 |
| SRR2868004 | Drought Stress (root) | 47.202 |
| SRR2967015 | Control (root) | 44.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.149 |
| SRR9715740 | Leaf | 34.481 |
| SRR9715741 | Leaf | 36.258 |
| SRR9715739 | Root | 5.306 |
| SRR9715742 | Root | 13.094 |
| SRR9715743 | Root | 10.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 98.952 |
| SRR8749028 | MeJA induced 9h | 66.690 |
| SRR8749029 | MeJA induced 9h | 108.970 |
| SRR8749030 | Uninduced | 82.318 |
| SRR8749031 | Uninduced | 116.435 |
| SRR8749032 | Uninduced | 87.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.195 |
| SRR8400027 | Control - Root | 36.737 |