Gene detail

Gene detail information of Glyur000017s00002401

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G39050.1	0	Kinesin motor family protein
NR	XP_004507491.1	0	PREDICTED: kinesin-related protein 4-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	8.00E-80	Kinesin-like protein NACK1
trEMBL	tr\|G7JIM7\|G7JIM7_MEDTR	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000017s00002401.1
CACACACACACACTCTCTCTCTCTCTCTCTCCCTGCAACTCCCCTTGTCTTCGAGAAGACGAAACTCTCTCTCTCTCTCTCTCTCTTTCTCCCCCCCTTGTGCTAAAGCGTCAAAGTAGACAAAAAAAGAAAAGAAAAAAGAGAACTAAATGTTCTTCGCTTTTGTTTCTATCGCCATGTGAGAGTTCTGACACACATTCTTCCTCTCCACTAGTTCCCTCGTTACTTCATATTTTACTGGTTTCGCCTGACTCACCAACTCGGAGCGAGTTAAGTGTATGGCCTCATCCTCACGAGCAAGAAGCAGCTCGCCATTCTCGCACCACAAACCTTCCACTCCTCACTCCTCTGCTTCCTCGTCTTATTCTTCTTCCTTCAACAGAATGTCTCGCTCCTGCTCCTCCTCTACGGCGTCGTTTTTCAACTCCGGTGGCGGTGGACTCAGCATGACTCCGAGTCGCGGTCGCAGCGAGTCAACCTATTACGACGCGCACGGTTATTCTTCCCCGGTTGAGTTCGGGATGGAGGAGGTGATCTCGGAGCCTCTAGATTCTTCTAGGTCTCGGGATAGCATTTCGGTGACGATTCGGTTTAGACCGTTGAGTGAAAGAGAATACCAGAGAGGGGATGAGATCGCGTGGTATGCGGATGGTGATAAGATTGTGAGGAATGAGTATAATCCAGATACTGCCTATGCATTTGATAGAGTGTTTGGACCACATACAAATTCTGACGAGGTGTATGAAGTAGCAGCTAAACCTGTGGTGAAGGCTGCAATGGAAGGGGTCAATGGAACTGTGTTTGCCTACGGTGTGACAAGTAGTGGAAAGACACATACGATGCATGGAGACCAAAATTCTCCTGGTATCATACCACTGGCTATAAAAGATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTACTTCGAGTGTCATATCTGGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTACGTGTTAGAGAAGATGCACAGGGTACTTATGTGGAGGGCATAAAGGAAGAAGTTGTTCTGTCTCCTGGACATGCGCTTTCCTTTATTGCTGCCGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAACCTCTTCAGCAGCCGAAGTCACACAATATTTACACTTATGATTGAAAGCAGTGCCCAAGGTGAAGATTATGATGGAGTGATATTCTCTCAGCTTAATTTGATCGATCTGGCTGGATCTGAAAGCTCAAAAACTGAAACAACTGGATTAAGAAGAAAAGAAGGATCATATATAAACAAAAGTCTTTTGACTCTTGGAACTGTTATTGGAAAATTGAGCGAGGGGAAAGCATATCATGTTCCATACCGAGACTCGAAGCTTACTCGCCTCCTGCAGTCTTCACTTAGTGGGCATGGTCATGTTTCACTTATATGCACTGTAACTCCAGCATCCAGTAATATGGAAGAAACTCATAATACCTTGAAGTTTGCAAGCAGGGCAAAGCGAGTAGAAATATATGCCTCATGTAATAAGATTATTGATGAAAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTTCTCAAACATGAACTTGATCAGCTGAAGAAGGGGATGCAACTTGGTGTCAACCATGAGGAGCTCATGACCTTAAAGCAAAAGTTAGAAGAAGGTCAAGTGAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGCGAAGGTTGCTCTTATGAGTAGGATCCAGAGGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATTCAATTCCTGGATATCTAACTGATGCTCCTGGCCACCAGCGAAGTCACTCTGTTGGCGAGGATGATAAATATGATGCCCTACGTGATGGAACTCTTCTGTTTGAAAGTGAGAGTCAAAAAGATGTTTCCACAGTGTCATCCGATCTGTCTCATGATGTTAGACATAGAAGATCGTCAAGTAGACGAAACGAAGAGCTCTCCCCATCTAGCAGTATTATAACTGAATCAACACAAGCTGGTGAACTGATCAGCAGAACAAGGCTACCAGCGGGAGGGATGACCATGTCTGATCAGATGGATCTTCTTGTAGAGCAAGTCAAAATGCTTGCTGGAGATATTGCTTTCAGTACCAGCACTCTGAAGCGCTTGACGGAGCAGTCTCTAAATGATCCTGAAAGCTCCAAAACTCAGATTGAGAACTTGGAACAAGAAATCCAAGAGAAAAGGAAGCAACTGAGGGTTTTAGAACAAAGAATAATTGAGTGTGGTGAATCTTCAGTAGCTGACTCATCCCGGGTTGAAATGCAGCAGACAGTCACCAGATTAATGACTCAGTGTAATGAAAAGGCGTTTGAGCTTGAGATAAAATCTGCGGACAACCGTGTCCTTCAGGAACAATTAAATAGTCAGTGTTCTGAAAACAGAGAATTGCAAGAAAAGGTGAAGCTGCTGGAGCAGAAACTGGCANCAGTTACTAGTGGTAACTCGTTAGTGCTTACTGATCAGTGTGTGTATGGAGAGCACATTGATGAGTTGAAAAGGAAAATACAGTCCCAGGAGATTGAAAATGAAAAACTGAAGCGAGAACAAGTTCACTTGTCAGAAGAGAATAGTGGATTGCATGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTAGCCTCTGCTGCTGCTGTGGAATTGAAGAATTTGGCTGGGGAGGTGACAAAACTTTCATTGCATAATGCAAAGTTGGAAAAAGAATTGATGGCTGCTCGAGAGCTGGCAAACTCTCGAAGTGCTGTCGTACAAACGGTTAATGGTTTTAACCGCAAGTACAATGATGCAAGATCTGGGAGGAAAGGGAGAATTTCTAACCGTGCTAATGAAAATTTGGGAGCTGGTATNGATGAGTTGGATTCATGGAGTCTTGAAGTTGATGATCTGAAGATGGAACTGCAGGCTAGGAAGCAACGAGAGGCAGCTCTTGAGGCTGCATTGGCTGAAAAGGAAATTGTGGAAGAGGAGTACAGGAAAAGGGTTGAAGAGGCCAGGAAAAGAGAAGCCTCCTTGGAGAATGATTTAGCAAATATGTGGGTCCTTGTTGCGAAGTTAAAGAAAGAAGGGGGTGCTGTTATAGAACCAAACATTGATAAAAAAATTGGGGATGGGGAACCACATACGAATGATCTGAAAACTAATGACATGGAAACTAATAATATCTCCAAGGAGCAGATTTTGGATGTAACAAAACCAGACANTGAAATTCCCAAGGAAGAATCTTTGGTTATTCGTCTTAAGGCACGGATGCAAGAAATGAAGGAAAAAGAACTCAAGCATCTTGGTAATGGAGATGCCAATTCCCATGTTTGTAAATGTGTAAATCTTGTTCACTTGCTTGTTCTGAATGTCCAATATGCCGAACAAATATTGCAGATAGGCTTTTTGCTTTTACATCTTAACCCTTTTAATAGAGGGTTCTACCTCATTGAGTNATTATATCCACGCGATCACGGGTGCAATTCTTTCATTAGTTTGCATATAGCAGAGTATAAGAACAGTGAATTTCCTCTTCACCAACCCCACCCCTTGCTGTCCTTGCATCATGATTCTATGTCTGCATTTTACCTGGGAAAGTATATATCTTGA

Protein Sequence

>Glyur000017s00002401.1
MASSSRARSSSPFSHHKPSTPHSSASSSYSSSFNRMSRSCSSSTASFFNSGGGGLSMTPSRGRSESTYYDAHGYSSPVEFGMEEVISEPLDSSRSRDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEYNPDTAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAQGEDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKAYHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASCNKIIDEKSLIKKYQREISVLKHELDQLKKGMQLGVNHEELMTLKQKLEEGQVKMQSRLEEEEEAKVALMSRIQRLTKLILVSSKNSIPGYLTDAPGHQRSHSVGEDDKYDALRDGTLLFESESQKDVSTVSSDLSHDVRHRRSSSRRNEELSPSSSIITESTQAGELISRTRLPAGGMTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSLNDPESSKTQIENLEQEIQEKRKQLRVLEQRIIECGESSVADSSRVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNSQCSENRELQEKVKLLEQKLAXVTSGNSLVLTDQCVYGEHIDELKRKIQSQEIENEKLKREQVHLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLHNAKLEKELMAARELANSRSAVVQTVNGFNRKYNDARSGRKGRISNRANENLGAGXDELDSWSLEVDDLKMELQARKQREAALEAALAEKEIVEEEYRKRVEEARKREASLENDLANMWVLVAKLKKEGGAVIEPNIDKKIGDGEPHTNDLKTNDMETNNISKEQILDVTKPDXEIPKEESLVIRLKARMQEMKEKELKHLGNGDANSHVCKCVNLVHLLVLNVQYAEQILQIGFLLLHLNPFNRGFYLIEXLYPRDHGCNSFISLHIAEYKNSEFPLHQPHPLLSLHHDSMSAFYLGKYIS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00017	204080	216549	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000017s00002401.1	PF00225.18	Kinesin	104	415	5.40E-104

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.778
SRR1783600	control	1.692
SRR1783602	moderate drought stress	0.739
SRR1811619	moderate drought stress	0.761

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.793
DRR006520	Root Summer glycyrrhizin high producing strain	1.900
DRR006521	Root Winter glycyrrhizin high producing strain	0.200
DRR006522	Root Winter glycyrrhizin high producing strain	0.181
DRR006523	Root Summer glycyrrhizin low producing strain	0.662
DRR006524	Root Summer glycyrrhizin low producing strain	0.742
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.650
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.574

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.695
SRR2868004	Drought Stress (root)	4.898
SRR2967015	Control (root)	4.469

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.680
SRR9715740	Leaf	0.881
SRR9715741	Leaf	1.274
SRR9715739	Root	0.183
SRR9715742	Root	1.837
SRR9715743	Root	1.080

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.447
SRR8749028	MeJA induced 9h	6.853
SRR8749029	MeJA induced 9h	6.283
SRR8749030	Uninduced	0.329
SRR8749031	Uninduced	0.221
SRR8749032	Uninduced	0.465

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.265
SRR8400027	Control - Root	7.486