Gene detail information of Glyur000017s00002394 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34630.1 | 4.00E-12 | |
| NR | XP_004507487.1 | 2.50E-54 | PREDICTED: uncharacterized protein LOC101491164 [Cicer arietinum] |
| trEMBL | tr|C6SZH4|C6SZH4_SOYBN | 1.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G04300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 165871 | 166380 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.799 |
| SRR1783600 | control | 33.971 |
| SRR1783602 | moderate drought stress | 25.377 |
| SRR1811619 | moderate drought stress | 25.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 94.899 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 93.487 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.771 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.961 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 68.455 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 67.185 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 57.582 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.195 |
| SRR2868004 | Drought Stress (root) | 147.421 |
| SRR2967015 | Control (root) | 133.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 97.263 |
| SRR9715740 | Leaf | 49.351 |
| SRR9715741 | Leaf | 76.850 |
| SRR9715739 | Root | 70.475 |
| SRR9715742 | Root | 107.850 |
| SRR9715743 | Root | 108.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 209.778 |
| SRR8749028 | MeJA induced 9h | 485.038 |
| SRR8749029 | MeJA induced 9h | 786.438 |
| SRR8749030 | Uninduced | 154.738 |
| SRR8749031 | Uninduced | 1054.576 |
| SRR8749032 | Uninduced | 796.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 70.557 |
| SRR8400027 | Control - Root | 60.696 |