Gene detail information of Glyur000017s00002389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAC41323.1 | 1.04E-23 | hypothetical protein [Lotus japonicus] |
| trEMBL | tr|Q8GSP5|Q8GSP5_LOTJA | 4.00E-24 | Putative uncharacterized protein {ECO:0000313|EMBL:BAC41323.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 129777 | 131093 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.041 |
| SRR1783600 | control | 3.124 |
| SRR1783602 | moderate drought stress | 3.235 |
| SRR1811619 | moderate drought stress | 5.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.211 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.899 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.455 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.011 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.129 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.916 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.039 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.155 |
| SRR2868004 | Drought Stress (root) | 0.112 |
| SRR2967015 | Control (root) | 0.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.142 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.056 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.035 |
| SRR8400027 | Control - Root | 0.055 |