Gene detail information of Glyur000017s00002385 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17880.1 | 2.00E-62 | basic transcription factor 3 |
| NR | KHN25407.1 | 3.07E-108 | Transcription factor BTF3 [Glycine soja] |
| trEMBL | tr|C6T0Q0|C6T0Q0_SOYBN | 4.00E-108 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15084.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 113291 | 116253 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000017s00002385.1 | PF01849.13 | NAC | 36 | 92 | 4.50E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 157.074 |
| SRR1783600 | control | 157.471 |
| SRR1783602 | moderate drought stress | 157.431 |
| SRR1811619 | moderate drought stress | 155.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 196.263 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 194.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 109.703 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 105.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 146.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 146.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 76.495 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 75.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 162.902 |
| SRR2868004 | Drought Stress (root) | 122.489 |
| SRR2967015 | Control (root) | 101.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 105.233 |
| SRR9715740 | Leaf | 123.307 |
| SRR9715741 | Leaf | 99.926 |
| SRR9715739 | Root | 59.093 |
| SRR9715742 | Root | 84.246 |
| SRR9715743 | Root | 73.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 522.175 |
| SRR8749028 | MeJA induced 9h | 199.194 |
| SRR8749029 | MeJA induced 9h | 412.363 |
| SRR8749030 | Uninduced | 99.934 |
| SRR8749031 | Uninduced | 66.377 |
| SRR8749032 | Uninduced | 125.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 173.594 |
| SRR8400027 | Control - Root | 141.733 |