Gene detail information of Glyur000017s00002380 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN18829.1 | 8.28E-85 | U-box domain-containing protein 43 [Glycine soja] |
| trEMBL | tr|K7LQJ6|K7LQJ6_SOYBN | 4.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21275.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00017 | 90094 | 90717 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.409 |
| SRR1783600 | control | 0.352 |
| SRR1783602 | moderate drought stress | 0.244 |
| SRR1811619 | moderate drought stress | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.508 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.391 |
| SRR2868004 | Drought Stress (root) | 5.336 |
| SRR2967015 | Control (root) | 4.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.788 |
| SRR9715740 | Leaf | 2.359 |
| SRR9715741 | Leaf | 2.766 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.093 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.137 |
| SRR8749028 | MeJA induced 9h | 6.641 |
| SRR8749029 | MeJA induced 9h | 1.786 |
| SRR8749030 | Uninduced | 3.345 |
| SRR8749031 | Uninduced | 38.990 |
| SRR8749032 | Uninduced | 3.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.210 |
| SRR8400027 | Control - Root | 2.335 |