Gene detail

Gene detail information of Glyur000016s00003096

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G03080.1	kinase interacting (KIP1-like) family protein
NR	XP_006575064.1	PREDICTED: intracellular protein transport protein USO1-like isoform X2 [Glycine max]
trEMBL	tr\|V7BI98\|V7BI98_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW16648.1}

Sequence

Transcript Sequence

>Glyur000016s00003096.1
ATTNTGTGATTATTTGTCTCTTCGCCCACCTCTTTTTTTTTTTACCCCGTTATTGGCGTTTGTCTCTTGGCTGGTAAGGACAGTGTGCCACCAACTACACAGCTAAAACTCAAAGGCAAGGAAAGCGGAGAGAGAGAAAAACAAAACACGCACACACACAGACAGCAAACATTGTGTACTGTGTTTGTGCGCAGAGCACGGAGATCTAAAAACCAACATGGGGTGACACACAAAAAAAACCTCAAAAAAAGAAGAAGATAAAACTAAAAAAAAATTAAAGCAGCTGAACTTGTTCATCGCCGCCGGTGGAAATCANAACCCAATATCTCAAAGTTTTAATTTTTGACTTTCATTTTTGGTAGTTTGTATTCATTCCTTCCGGCATATCAGATTTTTGTTCATTCAGTTTTGGAACTTGAGGTTGAGGTCCAAGTCCAANCGATCAGAAACGGTGACGACTTGGTTGACTTTGTAGTCAAACGCATATTGGGGTGGAGGTTTTTTTGGCTTCCTTCCAATCTTTCAGGGATTAAGTTCCTACAACATCAGAACACAAGGTGCTGGTGTCCTTTGTTGGAGTGATGGCGACTCTGTCTCATGCAGATTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAGAACTCAAAATGGCTTCAAGAAAATCTGACAGATATGGATGCCAAGGTGAAGCANATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTACTATAAAAAACGCCCAGAGCTTATGAAGATGGTTGAAGAGTTTTATAGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGCCAGGCCCATCGGACCATGTCTGAAGCATTTCCTAATCAAATTCCTATGATGCTGACAGATGATGAGACTGAGCCACGTACTCCAGAAACACGCCACCCTTCACGTGCGTTTCNTGACCCAGATGAATCACAAAAGGATGCTTCTGGTCATTTCCATGCTATCAAAAGAGATGGAGCTTATGGTGAAGAACCTAATTCTGCTNTGAGCAAAACAGGTTTAAGACAGCTCAATGATCTCGTCATCCCTGGAGAACATGTAAATCATGCAAAGTTTGCAGAAGGGCATGCTAGAAGGGGGCTGAATTTTCTTGAAACANGTGAGGAGAGTAGTGAGCTAAACAATGGAAGCCATGATGCTAAGGCTCAAGTCTTGTCTGAGTCTGACCGCGTGACAAAAGCTGAGGCAGAAATTTTGGCCTTAAAGAAAGCCCTTGCCAAATTAGAAGGTGAAAAGGAAGCTGGCTTGCTTCANTATCAGCAGAGTCTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTGTGCACGAGAGAATTCTCAAAGTCTTGATGAACGAGCAAGTAAAGCAGAAGCCGAAGTTCNAGCATTGAAGGAAGCTGTAATCAAATTACAGGATGAAAGGGAGGCTAGTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATATCTAATCTGGAGAAAAATATTTCTTTTGCGCAGAAGGATGCAGGAGAACTTAATGAACGTGCTACTAGAGCTGAAACTGAATCTGAGTCCCTGAAGCGGGACCTTGCTAGAGCAGAAGCTGAAAAGGAAGCAGCCCGTGTTCAATATGAACAGTGCTTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAAGCTGAGGAGAATGCTAGAAGGATTAATGAGCAAGCTAATATAGCTGAGAATGAAATTGAGGCTTTGAAGTTGGAAATTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAACATAAACTCTNTTGTGCTGAAGAGGAGGTGCGTAAGCTAAATTCCAAGATAGATGATGAGGTTGAAAAGTTACATAGTTCCGAACAGAAGTGTCTTCTTTTGGAAACATCAAATCACACTCTACAGTCTGAATTACAGTCTTTGGCACAAAAAATGGGGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAAGAATTGGGTAGACTTTGGAATTGCATACAAGAGGAGAGACTGCGTTTCATTGAAGCCGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCTGCTGATCTTCACAGTAAAGTGGAAATACTGGGGAATGCGGAATCACGTAAGCAGGCTCTAGAGGATGAAGTACACAGGGTCAATGAGGAAAACAAAATTTTAAACGAGCTCAAAATTTCTTCATCTTTGTCTATAAAAACTTTGCAGGATGAGACATTGAATTTGAAGGAGACAATAGAGAAACTAGAACAGGAGGTTGAGCTGCGACTTGGTGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAGTAAAAGACATGAAGCTATGATGGAGGAGGTCAGGTCAGCTGACTTAGACCCACAGTGCTTTGGCTCATCTGTGAAAAAATTGCAAGATGAGAACTCCAAGTTGAAGGAGACATGTGAGGCTGACAAAGATGAGAAAGCAGCGCTTCTGGTAAAATTAGAAACCATGGGGAAACTCTTGGAGAAAAATTCTGTTTTAGAGAATTCCCTTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAGGTAAATGTCTTGGAAGAAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGTTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAGGCCACAACTGAAAAGCTGGAGAAGCTCTCAGAAAAGAACAACCTTTTGGAAAATTCACTATTTGATGTGAATGCTGAACTTGAAGGATTAAGGGGAAAGTCCAAGATCTTAGAAGACACATGCCAGTTACTTGACCATGAGAAGTCTAGTATCTTTTCAGAGAAAGAAAGCTTAGTTTCACAGTTGAACACCACTCACCAAATGCTGAAAGATCTTGAAAAACAACACAGTGAATTGGAACTAAAGCATTTGGAGCTAAAAGGAGAAAGGGNGTCTGCACTTCAAAAGGTAGAAGAGCTATTGGTTTCCCTATATTCTGAGAGGGAAAATCATAGCAGAGTTGTGAAGTTGAATGAAGATGAACTGGCGGAGAAGGAATTACAAATTCATATTCTACAAGAAGATGCAAATTGCCGGAAAGAGGAATATGAGGAGGAACTGGACAGAGCTATACATGCTCAAATTGAAATTTTCGTGTTGCAGAATTGTATCCATGATTTGGAGAAAAAGAACTTTTCCCTTCTAGTTGAGTGCCAGGGACTTTTGGAGGCATCCAAAATTTCTGACAGAATGATATCTAAATTGGAGACTGNAAATGTTCAAAAGCAGGTTGATGTGAATTCTTTGTCTGAGAAATTTAGAATACTGAGGATTGGGCTGCTTCAGGTGTTGAAGATTCTTGACATTAANGATATGCTTGACGAAGACCAGATTCTTCTGAACCATATACATGGAAAACTTCAGGAGAGACAGAAGTCTTTTGACACAATTTTCAATGAAAGCCACCACATGGCCGTNGAGAATTCAGTTCTGATTTCATTCCTTGAGCAGTTGAAACTAACGGTAGAAAATCTTGTGATAGAAAGAGGTGCCCTTGATAAGGAGTTCGGGATACAGTCTAAGCAGCTAATGGCATTGCAAATAGAGGTCCAAAAGATATTGGAGAAGAATCAGGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAACGGAAGTAATGACAACTGAAATAGAGAATCTACGCAAACAGCTATCACACTTGGAAAAGAGTCACAACAACTTACAGGAAGAAAATTGCATGATAATTGAAGATAAAAAATCCTTGATGAGAAGTTTTGTGGATCTAGGTGAAGAGAAGAGTAACTTGGAAGAAGAAATTTGTGTCCTGAACCAAGAGACAATAGTTCAATCTAATATTTCTCTGATTTACCAGAATATTGTCTCTGANAAACTCCTGGAACTTAAAGAGCTAGGTGAAGATCTTGATAAACTTTGTTCAGCAAATAACAACCTTGAGGAGAGATTGAAGATAATGGTGCACAAATTAGAAAATGCAGAAATGGAAAATTCACATCTTAAAGAGTCATTTGTAAAGTCAAATGTTGAATTACATTTAGTTGAATCTGTCAATGATCAATTGAGTTGTCAGATTAGAAATGAAAGGGAAATGTTGTGTCAAAAGGAAAATGAGCTTTTGGAAGCGGCCGAGATGTTCCGTGCTTTACACACTGAGAAAACAGAATTGCAAAGAACGTTGGAAGATCTGAAGATTAAGTATGATGAGGCCAGGGGGATACTTGAAGAACAGGCTAATCAAATATTCAAATTGTCCTCGGACAAGGATCGCCAAAATGAAGAGCTCAGATGCCTTTGNGAAGTGAATCAGAAGTTGGAGTCTGAAATGAAGCACCTACATCAAGAACTTGGAGAAACTAAACTGAGGGAAAAGAAGCTGAGTCATGAAGTACATGAGGGAATAAATGAGATTGAACAATGGGAAACTCAGGCTGCAAATTTCTATGTCGAACTGCAGATTTCTGCTGTCAACGAAACATTATTTGAAGGGAAGGTCTGTGAGCTAGCTGATACATGTGAGCATCTTGAACGCAGAAACTACGCCTATGACATGGAAAGTGAACAGCTGAAAGAAATAGTTAGCAAGTTGGAAGGTGAAAATGGAAGACTGTGTGATCAATTAGCTGCTTATGTCCCAGCTGTCAGTGCTTTGAATGATTGTATTACATCTCTGGAGATGCAGACTCTTGTACAGGCAAAACCTCATGATGATGAAGAATCGAAGGTTAAAAATTTGGTGAATCACCAATACACTGAAAATGGTCAACAAACAGGTGAAGATCAGACTGTTACGGCACCAGATGCACTCCTTGACTTCCAAGACATGCAGAGAAGGGTCAATGCAATTGCAATGGCAGTTAAGCAGTTAAATGGAAGTTTCAAGCCCAAGGATGAAATGAGAGAGATTCAAGAGTTAAAATCAGGAATTAGCTGGCATCAAGAGAATATCCAAGCAAGCAAGCATGTTGCTCAAGTTGATGAAGCAAAGCAGCACCAGGGTGGACCCGCTAATGAAGAGAAGACGGGGAAATCAAGGCTAGATGTTCCTGTAACAGAGATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAATATCCGAATGTTCGTCATATGGGATAAGCAGGAGAGGAACTCTTGAGGCCAATGATCAGATGCTTGAGTTGTGGGAAACAGCTGATAAGGATGAGATTGTTGACCTGCAAGTTGACAACANGACACAGAAGATAGCGGCGGCGGGACCAGAAGAAGATCATCATCAAAGAGGAGGAACAACCAAGGAACCCAAAAACAAACATCCTTCAGCAGAGTCCTTGGTGGAAGAAAAGGAGTTGAGTGTGGTGGACAAACAAGAGATCTCAAGAAGATTGACACAGCCACACGAAGAAGGCAACAAGAGCAAGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACAAACCTTCAAATAACCATACAAGATTTGATGCAGAAGGTGGAAATTAATGAGAAGGGCACAACAAAGGGAAGAAAAGGTGCTGAGTATGATAATGTAAAAGGGCAGCTTGAAGCTGCTCAGGAGACCATCACAAAGTTGTTTGATGCCAACCGCAAGCTGATGAAGAATGTGGAAGAGGGTGCAGAAGAGTCAGATGAGAGTGGAAGTGTAAGCAGAAGGAGAGTCTCAGAACAGGCAAGGAAAGGGTCAGAGAAAATAGGACAACTTCAGTTGGAAGTGCAAAGACTGCAGTTTCTGCTTTTGAAACTGAATGATGGGAAAGAGAGCAAAGAGAAAACCAAAATGGCTGATCGAAGTCCAAGAGTGCTTTTGCGGGATTATCTCTATGGTGGGGCGAGAANGAACCACCAAAAGAGCAAGAAAAAAATACCCTTTTGTGCATGTGTGAAACCACCCACCAAGGGAGATTGATTGTTACCGTAGTTTGAAGTCCATGAGACATTAGCTTTCTCAGTTTCTTGTTTGTAAATTTTCCTTTCCTTTTTATAGATGCTTTTAAGACCCTTACATATTTTGATCCTGCTGTACATNTTGTGCCTCATGTAGTCGTAAGAAG

Protein Sequence

>Glyur000016s00003096.1
MATLSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKXMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRQAHRTMSEAFPNQIPMMLTDDETEPRTPETRHPSRAFXDPDESQKDASGHFHAIKRDGAYGEEPNSAXSKTGLRQLNDLVIPGEHVNHAKFAEGHARRGLNFLETXEESSELNNGSHDAKAQVLSESDRVTKAEAEILALKKALAKLEGEKEAGLLXYQQSLEKLSNLELEVSCARENSQSLDERASKAEAEVXALKEAVIKLQDEREASLLQYQECLEKISNLEKNISFAQKDAGELNERATRAETESESLKRDLARAEAEKEAARVQYEQCLETLSKLEERLKEAEENARRINEQANIAENEIEALKLEITKLNEEKEDAALRYQQCLEIISSLEHKLXCAEEEVRKLNSKIDDEVEKLHSSEQKCLLLETSNHTLQSELQSLAQKMGSQSEELSEKQKELGRLWNCIQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADLHSKVEILGNAESRKQALEDEVHRVNEENKILNELKISSSLSIKTLQDETLNLKETIEKLEQEVELRLGERNALQQEIYCLKEELNDVSKRHEAMMEEVRSADLDPQCFGSSVKKLQDENSKLKETCEADKDEKAALLVKLETMGKLLEKNSVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSTLVAEKATLFSQLQATTEKLEKLSEKNNLLENSLFDVNAELEGLRGKSKILEDTCQLLDHEKSSIFSEKESLVSQLNTTHQMLKDLEKQHSELELKHLELKGERXSALQKVEELLVSLYSERENHSRVVKLNEDELAEKELQIHILQEDANCRKEEYEEELDRAIHAQIEIFVLQNCIHDLEKKNFSLLVECQGLLEASKISDRMISKLETXNVQKQVDVNSLSEKFRILRIGLLQVLKILDIXDMLDEDQILLNHIHGKLQERQKSFDTIFNESHHMAVENSVLISFLEQLKLTVENLVIERGALDKEFGIQSKQLMALQIEVQKILEKNQELKLTISKGEERTEVMTTEIENLRKQLSHLEKSHNNLQEENCMIIEDKKSLMRSFVDLGEEKSNLEEEICVLNQETIVQSNISLIYQNIVSXKLLELKELGEDLDKLCSANNNLEERLKIMVHKLENAEMENSHLKESFVKSNVELHLVESVNDQLSCQIRNEREMLCQKENELLEAAEMFRALHTEKTELQRTLEDLKIKYDEARGILEEQANQIFKLSSDKDRQNEELRCLXEVNQKLESEMKHLHQELGETKLREKKLSHEVHEGINEIEQWETQAANFYVELQISAVNETLFEGKVCELADTCEHLERRNYAYDMESEQLKEIVSKLEGENGRLCDQLAAYVPAVSALNDCITSLEMQTLVQAKPHDDEESKVKNLVNHQYTENGQQTGEDQTVTAPDALLDFQDMQRRVNAIAMAVKQLNGSFKPKDEMREIQELKSGISWHQENIQASKHVAQVDEAKQHQGGPANEEKTGKSRLDVPVTEIEVLPKDIMLDQISECSSYGISRRGTLEANDQMLELWETADKDEIVDLQVDNXTQKIAAAGPEEDHHQRGGTTKEPKNKHPSAESLVEEKELSVVDKQEISRRLTQPHEEGNKSKVLERLDSDAQKLTNLQITIQDLMQKVEINEKGTTKGRKGAEYDNVKGQLEAAQETITKLFDANRKLMKNVEEGAEESDESGSVSRRRVSEQARKGSEKIGQLQLEVQRLQFLLLKLNDGKESKEKTKMADRSPRVLLRDYLYGGARXNHQKSKKKIPFCACVKPPTKGD

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00016	590887	598924	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000016s00003096.1	PF07765.7	KIP1	14	87	5.00E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	45.504
SRR1783600	control	45.704
SRR1783602	moderate drought stress	56.125
SRR1811619	moderate drought stress	55.827

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	58.277
DRR006520	Root Summer glycyrrhizin high producing strain	57.599
DRR006521	Root Winter glycyrrhizin high producing strain	43.242
DRR006522	Root Winter glycyrrhizin high producing strain	42.103
DRR006523	Root Summer glycyrrhizin low producing strain	63.100
DRR006524	Root Summer glycyrrhizin low producing strain	62.915
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.872
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.847

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	52.168
SRR2868004	Drought Stress (root)	65.505
SRR2967015	Control (root)	65.574

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.469
SRR9715740	Leaf	15.894
SRR9715741	Leaf	17.345
SRR9715739	Root	5.649
SRR9715742	Root	17.270
SRR9715743	Root	16.187

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.061
SRR8749028	MeJA induced 9h	31.663
SRR8749029	MeJA induced 9h	20.662
SRR8749030	Uninduced	41.922
SRR8749031	Uninduced	39.848
SRR8749032	Uninduced	34.768

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	48.126
SRR8400027	Control - Root	46.826