Gene detail

Gene detail information of Glyur000016s00003094

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51895.1	0	sulfate transporter 3;1
NR	XP_004495176.1	0	PREDICTED: sulfate transporter 3.1-like [Cicer arietinum]
COG	YP_006180043.1	3.00E-102	sulfate transporter family protein [Halobacillus halophilus DSM 2266]
Swissprot	tr\|Q9SV13\|SUT31_ARATH	0	Sulfate transporter 3.1
trEMBL	tr\|G7IDK9\|G7IDK9_MEDTR	0	Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 {ECO:0000313\|EMBL:AES60845.1}

Sequence

Transcript Sequence

>Glyur000016s00003094.1
TCTTAATTTCCCTCCCTCCTTAAATTATAAATATAAATATTACTGCCCTCCTCTTGTTCCTTCACTCAGTACCCTTATCCCCCCCCTTTCTTCTCGATCCTCAATCACCACCGCCTCAACCGTTTCTAATGTCAGTTATGTTCACAAAAACACCGCCATTAATTAATTAATCACCATATCTTCCATTCATCATTTACATATACATAGCTAGAATCCTCCCAATTCCTAGCCGCCAAGGCATTACAAAATAGACACATAAATAGTAGCTCATTAATTATATACATTTTGCGCATATATATAGTTGTGTATTGATTAACTATTAATTACCCGAGCTAGCTAGCTAGCTAACTAAGGATCGATATGGGTAACGTAGACTATGCGTACCCTTCGGCGATGAACGCTGATGAGAGCAGCGTGCACCGCGTGGCGGTTCCACCACCCCAACCGTTTTTCAAGTCCCTAAAGTACTCTCTGAAAGAGACGTTCTTCCCAGATGACCCTTTGANGCGGTTTAAGAACCAACCAGCCTCCAAAAAGTTCGTGCTTGGCCTTCAGTACTTCTTCCCAATATTCGAGTGGGCACCTAACTACACCCTTCANTTCATGAAATCTGATCTCATAGCTGGCATCACCATCGCTAGCTTGGCCATTCCTCAAGGAATCAGTTATGCCAAACTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGATTTATGCGATGATGGGTAGCTCAAGGGATTTGGCAGTGGGGACCGTGGCTGTTGGATCTCTTCTCTTGGGTTCCCTGTTGGCCAATGAAGTTAACCCCAACGATAACCCGAAGCTTTTCCTCCACCTAGCTTTCACGGCTACATTCTTTGCTGGGGTTTTGCAGGCTGCATTGGGTCTCTTCAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTTTGTCTGCAGCAGCTAAAATCGATTCTAGGCCTTGAGCATTTCACCCATGCCGCCGATCTCGTATCCGTTATGCGCTCTGTTTTTACCCAAACTCACCAGTGGAGGTGGGAAAGCGCTGTGCTAGGATGTTGCTTCATTTTCTTCCTCCTTTTCACAAGATACTTCAGCAAAAAACAACCGAAGTTCTTTTGGGTGTCAGCAATGGCGCCGTTGNCGTCCGTTATACTGGGAAGTGTGCTGGTTTATTTCACTCACGCCGAGAACCACGGCGTTCAAGTGATTGGAGAATTGAAGAAGGGACTAAATCCACCATCCCTCACAGAATTGGTATTTGTGTCGCCTTATATGACAACGGCTGTGAAAACCGGCCTCATCGTTGGCATCATAGCGCTAGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCACATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCAGCTGTGAACTACAATGCTGGATGCAAGACAGCNGCATCCAACATTGTGATGTCAATGGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCTCTGGTGGTACTATCAGCCATAATTGTATCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTNTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCCGTTGCAATATCTGTACTTCGGATACTTCTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTAATATACAGAAATGTTGAGCAATATCCAAGTGCAAATCATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCAATTTACTTTGCCAATGCAGGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAGCTACAGGGGAGACAAGTTTGCAGTATGTTATAATGGATATGAGTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAGATTGCTGATAGAAGAGAGNTGCAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTAAACAAATCCAACTTCCAAAAGGATATAGGGGAAAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGAGCATGTAACTTTATGCTCCATGCATGCAAAACGAATCCCTGCAGAAAAGATGAATCATCAGAGGGTTGGAACAATGTCTGAGACTCTGAGCCAGCCATATATCAATGCATGATTTAAAGAGCTCCTCACGAAGCTTACTCGCTTTTCGTCTCAACTATAATATTATTACCATTGCAATATGTGGCATGAGAGTTTGTGAATCATGCCGCTGAATAGGAAAATGTAAGATATGCACGAGTCTTCTAATTTCTCAACTTTGCTTTACCTGCAACGGTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00016	583079	589955	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0055085 transmembrane transport

cellular_component

GO:0009507 chloroplast

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0008271 secondary active sulfate transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000016s00003094.1	PF13792.1	Sulfate_tra_GLY	68	149	6.10E-31
Glyur000016s00003094.1	PF00916.15	Sulfate_transp	181	459	2.80E-104
Glyur000016s00003094.1	PF01740.16	STAS	514	632	1.20E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.434
SRR1783600	control	5.241
SRR1783602	moderate drought stress	4.993
SRR1811619	moderate drought stress	4.919

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.168
DRR006520	Root Summer glycyrrhizin high producing strain	4.106
DRR006521	Root Winter glycyrrhizin high producing strain	1.155
DRR006522	Root Winter glycyrrhizin high producing strain	1.133
DRR006523	Root Summer glycyrrhizin low producing strain	0.248
DRR006524	Root Summer glycyrrhizin low producing strain	0.267
DRR006525	Leaf Summer glycyrrhizin high producing strain	25.486
DRR006526	Leaf Summer glycyrrhizin high producing strain	25.396

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.331
SRR2868004	Drought Stress (root)	17.433
SRR2967015	Control (root)	23.262

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.175
SRR9715740	Leaf	13.686
SRR9715741	Leaf	9.633
SRR9715739	Root	9.341
SRR9715742	Root	9.134
SRR9715743	Root	8.459

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	28.599
SRR8749028	MeJA induced 9h	15.359
SRR8749029	MeJA induced 9h	4.755
SRR8749030	Uninduced	2.873
SRR8749031	Uninduced	0.399
SRR8749032	Uninduced	1.296

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.282
SRR8400027	Control - Root	16.118