Gene detail information of Glyur000016s00003075 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18310.1 | 2.00E-37 | |
| NR | XP_006588648.1 | 0 | PREDICTED: uncharacterized protein LOC100797045 isoform X1 [Glycine max] |
| trEMBL | tr|I1JF66|I1JF66_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G16240.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 419022 | 420773 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.157 |
| SRR1783600 | control | 2.166 |
| SRR1783602 | moderate drought stress | 2.434 |
| SRR1811619 | moderate drought stress | 2.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.417 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.565 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.937 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.619 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.329 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.932 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.310 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.988 |
| SRR2868004 | Drought Stress (root) | 1.743 |
| SRR2967015 | Control (root) | 1.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.734 |
| SRR9715740 | Leaf | 2.720 |
| SRR9715741 | Leaf | 2.748 |
| SRR9715739 | Root | 1.391 |
| SRR9715742 | Root | 3.222 |
| SRR9715743 | Root | 4.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.645 |
| SRR8749028 | MeJA induced 9h | 1.923 |
| SRR8749029 | MeJA induced 9h | 1.703 |
| SRR8749030 | Uninduced | 0.313 |
| SRR8749031 | Uninduced | 0.281 |
| SRR8749032 | Uninduced | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.180 |
| SRR8400027 | Control - Root | 5.567 |