Gene detail

Gene detail information of Glyur000016s00003069

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G22942.1	7.00E-23	G-protein gamma subunit 2
NR	XP_003590556.1	7.54E-62	hypothetical protein MTR_1g071100 [Medicago truncatula]
Swissprot	tr\|Q9FDX9\|GG1_ARATH	1.00E-29	Guanine nucleotide-binding protein subunit gamma 1 (Precursor)
trEMBL	tr\|G7ICP9\|G7ICP9_MEDTR	3.00E-62	Guanine nucleotide-binding protein subunit gamma 2 {ECO:0000313\|EMBL:AES60807.1}

Sequence

Transcript Sequence

>Glyur000016s00003069.1
CACACATATCCAACTTGCTGGCTTGCTCATCTGAATTGCAAAGCAAACAAAACAAAAATAAGAAAGCGCACCGTCGCAGCAGTGTCTTCTTAATGGTTAGCACTTAGCAGAGGCATGAAAGAGACAGGAAGAGCTCGCTTTTTGATGCGTATTAGTAATATAATTTCGATTTTTGGATGAGTGCACAGAGCACAAGTAGAAAGAAAAAAGGGCCNTTTTGAAGAATAGAATTTGGAAATCATTTGAGAGGGAAGAAGAGAAGAGGCTCTTTTCCTTCCTATGCAGCATTGGGTGTTTTTCCACATTCTCAGATCTGTGTCGTATTAAGCACAAGGAAGGAGATTTTACTGGATGAGTTGGAGTTGATACTTATGGCGTCTGAAACGGCGTCGTCGGCGGATGAAGAAACCGTTGTTGTTCCAGTTGTAGGAGCAGGAGGGACAGATAAAAGAGGGAAGCATCGTATTCTTGCCGAATTGAAGCGTCTCGACCAAGACTCCAAATTTCTTCAGGAAGAATTGGAAGAGCTTGAGAAAACAGAAAATGTGTCAGCCATATGCATGGACTTGCTACAAAACATGGACAGTAGGCCTGATCCACTACTCCCAGAAATACATGGACCTGTAAACCTCATGTGGGATAGATGGTTTGAAGGGCCTCAGGATCCACAAGCATGTAGATGTTGGATACTCTGATTTGGAGCTGTGTGTCGATTGCGTTGGAAATAGGATGCAAATGTTACTGCATAAAAGTGACTCTGGAACTGAAGAAAATGTTTGATGGCATTTTATATCACGCACACTATTCTCTAATGGATCCGTGATTTGTATCACATTAGATTAGATTCTGCACATAATACTCTTTATGTGTAATCACATTTGTTAACTGCATTCACTTGGGAAGTATAGTTATTTGTGCTTATGCGAGTGTGCATGCAATCCAAACCCATCTGTTAATGTGCCTTGTTGGTAACTTTTATGTGTGTGCATGAGTCAATGTATAGATGACAGCTTTTGGTGGTAACTTTGATCAGCATTCAGCCTTGATGGAGGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00016	392754	395568	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007186 G-protein coupled receptor signaling pathway

cellular_component
GO:0005834 heterotrimeric G-protein complex

molecular_function
GO:0004871 signal transducer activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000016s00003069.1	PF00631.17	G-gamma	36	107	6.10E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.273
SRR1783600	control	8.134
SRR1783602	moderate drought stress	5.453
SRR1811619	moderate drought stress	5.549

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.365
DRR006520	Root Summer glycyrrhizin high producing strain	15.214
DRR006521	Root Winter glycyrrhizin high producing strain	7.962
DRR006522	Root Winter glycyrrhizin high producing strain	7.023
DRR006523	Root Summer glycyrrhizin low producing strain	12.191
DRR006524	Root Summer glycyrrhizin low producing strain	12.153
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.686
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.675

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.136
SRR2868004	Drought Stress (root)	11.117
SRR2967015	Control (root)	12.881

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.254
SRR9715740	Leaf	7.357
SRR9715741	Leaf	4.254
SRR9715739	Root	3.358
SRR9715742	Root	4.352
SRR9715743	Root	3.471

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.346
SRR8749028	MeJA induced 9h	2.301
SRR8749029	MeJA induced 9h	2.735
SRR8749030	Uninduced	1.818
SRR8749031	Uninduced	0.906
SRR8749032	Uninduced	0.691

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.171
SRR8400027	Control - Root	19.976