Gene detail information of Glyur000016s00003060 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22970.1 | 1.00E-86 | Protein of unknown function (DUF506) |
| NR | XP_007144680.1 | 0 | hypothetical protein PHAVU_007G176100g [Phaseolus vulgaris] |
| trEMBL | tr|V7BFP2|V7BFP2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW16674.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 349946 | 352836 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000016s00003060.1 | PF04720.7 | DUF506 | 78 | 301 | 7.90E-70 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.588 |
| SRR1783600 | control | 16.805 |
| SRR1783602 | moderate drought stress | 23.536 |
| SRR1811619 | moderate drought stress | 23.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 61.343 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 49.421 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 48.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.913 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.283 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.730 |
| SRR2868004 | Drought Stress (root) | 22.938 |
| SRR2967015 | Control (root) | 35.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.374 |
| SRR9715740 | Leaf | 45.042 |
| SRR9715741 | Leaf | 33.891 |
| SRR9715739 | Root | 38.091 |
| SRR9715742 | Root | 50.879 |
| SRR9715743 | Root | 48.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.793 |
| SRR8749028 | MeJA induced 9h | 21.998 |
| SRR8749029 | MeJA induced 9h | 16.453 |
| SRR8749030 | Uninduced | 8.892 |
| SRR8749031 | Uninduced | 24.228 |
| SRR8749032 | Uninduced | 22.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.351 |
| SRR8400027 | Control - Root | 22.151 |