Gene detail information of Glyur000016s00003029 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN03852.1 | 1.76E-11 | hypothetical protein glysoja_011081 [Glycine soja] |
| trEMBL | tr|K7LH75|K7LH75_SOYBN | 6.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G03895.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 202904 | 204109 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.557 |
| SRR1783600 | control | 0.452 |
| SRR1783602 | moderate drought stress | 0.439 |
| SRR1811619 | moderate drought stress | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.376 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.476 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.014 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.559 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.631 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.756 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.776 |
| SRR2868004 | Drought Stress (root) | 5.023 |
| SRR2967015 | Control (root) | 4.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.515 |
| SRR9715740 | Leaf | 1.688 |
| SRR9715741 | Leaf | 4.612 |
| SRR9715739 | Root | 0.501 |
| SRR9715742 | Root | 1.189 |
| SRR9715743 | Root | 0.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.993 |
| SRR8749028 | MeJA induced 9h | 8.276 |
| SRR8749029 | MeJA induced 9h | 3.889 |
| SRR8749030 | Uninduced | 19.390 |
| SRR8749031 | Uninduced | 33.643 |
| SRR8749032 | Uninduced | 17.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.438 |
| SRR8400027 | Control - Root | 3.119 |