Gene detail information of Glyur000016s00003005 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42450.1 | 0 | alpha/beta-Hydrolases superfamily protein |
| NR | KEH42566.1 | 0 | alpha/beta-hydrolase superfamily protein [Medicago truncatula] |
| trEMBL | tr|A0A072VLR1|A0A072VLR1_MEDTR | 0 | Alpha/beta-hydrolase superfamily protein {ECO:0000313|EMBL:KEH42566.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 72945 | 79702 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000016s00003005.1 | PF01764.20 | Lipase_3 | 242 | 375 | 1.80E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.017 |
| SRR1783600 | control | 2.031 |
| SRR1783602 | moderate drought stress | 3.364 |
| SRR1811619 | moderate drought stress | 3.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.871 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.892 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.300 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.864 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.645 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.126 |
| SRR2868004 | Drought Stress (root) | 4.950 |
| SRR2967015 | Control (root) | 4.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.900 |
| SRR9715740 | Leaf | 2.875 |
| SRR9715741 | Leaf | 3.207 |
| SRR9715739 | Root | 0.204 |
| SRR9715742 | Root | 2.145 |
| SRR9715743 | Root | 1.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.075 |
| SRR8749028 | MeJA induced 9h | 5.056 |
| SRR8749029 | MeJA induced 9h | 3.161 |
| SRR8749030 | Uninduced | 3.200 |
| SRR8749031 | Uninduced | 3.860 |
| SRR8749032 | Uninduced | 2.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.882 |
| SRR8400027 | Control - Root | 4.367 |