Gene detail information of Glyur000016s00003004 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14420.1 | 2.00E-37 | HR-like lesion-inducing protein-related |
| NR | AFK36439.1 | 1.25E-96 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S847|I3S847_LOTJA | 5.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:AFK36439.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 68932 | 71885 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000016s00003004.1 | PF05514.6 | HR_lesion | 1 | 141 | 1.90E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.305 |
| SRR1783600 | control | 52.964 |
| SRR1783602 | moderate drought stress | 49.103 |
| SRR1811619 | moderate drought stress | 49.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.396 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 78.598 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 319.312 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 311.511 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.171 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 74.562 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.749 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 186.390 |
| SRR2868004 | Drought Stress (root) | 122.686 |
| SRR2967015 | Control (root) | 118.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.030 |
| SRR9715740 | Leaf | 56.118 |
| SRR9715741 | Leaf | 66.318 |
| SRR9715739 | Root | 188.941 |
| SRR9715742 | Root | 122.643 |
| SRR9715743 | Root | 135.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 187.539 |
| SRR8749028 | MeJA induced 9h | 73.491 |
| SRR8749029 | MeJA induced 9h | 140.566 |
| SRR8749030 | Uninduced | 53.922 |
| SRR8749031 | Uninduced | 56.948 |
| SRR8749032 | Uninduced | 75.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 147.740 |
| SRR8400027 | Control - Root | 127.408 |