Gene detail information of Glyur000015s00000878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54500.1 | 1.00E-110 | |
| NR | XP_006578483.1 | 0 | PREDICTED: uncharacterized protein LOC100812174 isoform X8 [Glycine max] |
| trEMBL | tr|K7LQM1|K7LQM1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21580.8} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 649634 | 659364 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.439 |
| SRR1783600 | control | 18.448 |
| SRR1783602 | moderate drought stress | 22.072 |
| SRR1811619 | moderate drought stress | 22.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.476 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.222 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.647 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.096 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.151 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.267 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.349 |
| SRR2868004 | Drought Stress (root) | 55.013 |
| SRR2967015 | Control (root) | 43.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 168.115 |
| SRR9715740 | Leaf | 202.705 |
| SRR9715741 | Leaf | 217.092 |
| SRR9715739 | Root | 6.253 |
| SRR9715742 | Root | 35.881 |
| SRR9715743 | Root | 29.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.650 |
| SRR8749028 | MeJA induced 9h | 14.204 |
| SRR8749029 | MeJA induced 9h | 13.270 |
| SRR8749030 | Uninduced | 19.841 |
| SRR8749031 | Uninduced | 23.304 |
| SRR8749032 | Uninduced | 14.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.008 |
| SRR8400027 | Control - Root | 11.202 |