Gene detail information of Glyur000015s00000841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08315.1 | 6.00E-40 | ARM repeat superfamily protein |
| NR | XP_003523961.1 | 1.34E-118 | PREDICTED: U-box domain-containing protein 4-like [Glycine max] |
| Swissprot | tr|Q0IMG9|SL11_ORYSJ | 2.00E-15 | E3 ubiquitin-protein ligase SPL11 |
| trEMBL | tr|K7KJZ1|K7KJZ1_SOYBN | 5.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G17570.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 511786 | 512784 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.001 |
| SRR1783600 | control | 3.157 |
| SRR1783602 | moderate drought stress | 3.457 |
| SRR1811619 | moderate drought stress | 3.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.890 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.013 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.405 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.731 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.034 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.696 |
| SRR2868004 | Drought Stress (root) | 4.800 |
| SRR2967015 | Control (root) | 4.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.421 |
| SRR9715740 | Leaf | 1.601 |
| SRR9715741 | Leaf | 1.916 |
| SRR9715739 | Root | 4.656 |
| SRR9715742 | Root | 4.747 |
| SRR9715743 | Root | 3.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.133 |
| SRR8749028 | MeJA induced 9h | 0.252 |
| SRR8749029 | MeJA induced 9h | 0.001 |
| SRR8749030 | Uninduced | 0.364 |
| SRR8749031 | Uninduced | 0.082 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.418 |
| SRR8400027 | Control - Root | 4.540 |