Gene detail information of Glyur000015s00000820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46690.1 | 3.00E-32 | SAUR-like auxin-responsive protein family |
| NR | XP_003602327.1 | 4.15E-59 | Auxin-induced protein 10A5 [Medicago truncatula] |
| Swissprot | tr|P33082|AXX15_SOYBN | 2.00E-14 | Auxin-induced protein X15 |
| trEMBL | tr|G7J880|G7J880_MEDTR | 3.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:AFK37533.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 413584 | 413955 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000820.1 | PF02519.9 | Auxin_inducible | 33 | 107 | 5.90E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.408 |
| SRR1783600 | control | 32.497 |
| SRR1783602 | moderate drought stress | 21.519 |
| SRR1811619 | moderate drought stress | 21.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.775 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.027 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.328 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.371 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.715 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 50.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.008 |
| SRR2868004 | Drought Stress (root) | 203.094 |
| SRR2967015 | Control (root) | 169.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 220.281 |
| SRR9715740 | Leaf | 130.001 |
| SRR9715741 | Leaf | 219.498 |
| SRR9715739 | Root | 79.942 |
| SRR9715742 | Root | 116.930 |
| SRR9715743 | Root | 110.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 241.752 |
| SRR8749028 | MeJA induced 9h | 278.175 |
| SRR8749029 | MeJA induced 9h | 347.903 |
| SRR8749030 | Uninduced | 343.063 |
| SRR8749031 | Uninduced | 700.290 |
| SRR8749032 | Uninduced | 392.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 80.446 |
| SRR8400027 | Control - Root | 110.577 |