Gene detail

Gene detail information of Glyur000015s00000819.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G24430.1	0	Calcium-dependent protein kinase (CDPK) family protein
NR	XP_004502721.1	0	PREDICTED: CDPK-related kinase 4-like [Cicer arietinum]
COG	YP_007468874.1	1.00E-26	serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|Q9FIM9\|CAMK4_ARATH	0	CDPK-related kinase 4
trEMBL	tr\|I1KAY9\|I1KAY9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G13920.1}

Sequence

Transcript Sequence

>Glyur000015s00000819.1
AATTTAACTCTTTTCTTTTCCTTCTTCTACTTTTACTTCCATTCTCTCTCTTTCTCTCTCTACAGTAGTGTGTGTCTGTCTTCTCAATTTCTCCGGCGAAGTTTCCTCTCTCTTGTCGGAGCCTTTGACTTGCGCCGATCACCGTCCAGTGACGACGACATAGGCAGCTATGGGTCATTGCTGCAGCAAAAACATTGCCGTCAACAACGAAACCGTCCCCGCCGATCACGGCACCAAACTGCCCAATAATCGCGCCCCATCGCCGGCGACGCAGCCAGCCGGAAACTCCGTCTCCGGCGTCAGCGATGCGACTACTCCGGGAAGGTACACGCCGGCGAACTCGTTCTCCACCAGCCCCTTCACAAGCCCCCTCCCGCCCGGCGTGGCGCCATCTCCGGCAAAGACTCCCGGCAGGAAGTTCCGGTGGCCCCTGCCGCCGCCTTCCCCGGCGAAGCCGATCATGGCTGCGCTTCTGCGGCGGCAGGGGAAGACGGCGAAGCCGAAGGACGGGCCCATACCGGAGGAGCAAGGTGAAGGAGGGGAAGGAGAGAGGTCTCTGGATAAGAGCTTTGGGTATGGGAAGAATTTTGGGGCGAAGTTCGAGCTTGGGAAGGAAGTGGGTCGTGGCCATTTTGGTCACACTTGTTGGGCCAAAGGGAAGAAGGGTGAGCTTAAGGGTCAATCAGTGGCTGTGAAAATCATATCCAAGGCTAAGATGACTTCGGCAATAGCAATTGAAGATGTGAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTGAATAACGTCTACATAGTGATGGAAGGTGGAAGATACCCAGAGGATGACGCTAAAGCTATTCTTGTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGATGAGGATGCTGTGATGAAAGTTATTGATTTTGGTCTATCTGATTTTGTTAGGCCAGATCAACGNCTGAATGATATTGTTGGCAGTGCCTACTATGTTGCACCAGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGACTTATGGAGNATTGGAGTTATATCATACATATTGTTATGTGGAAGTAGACCATTTTGGGCACGGACTGAATCAGGAATCTTCCGGTCCGTGTTAAGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGATTTTGTGAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGACAGCTGCTCAAGCTCTAAGTCACCCATGGTTGAGAGATGATAAAAATGCTATTCCTTTAGATATTCTGATTTACAAATTAGTCAAATCATATGTGCGCGCCTCACCTTTGAAACGTGCAGCATTGAAGGCTCTCTCAAAAGCATTGACAGAAGATGAGCTTATCTACCTCAGAGCACAGTTTAGCCTCTTGGAACCTAAAGATGGTTGCGTTTCTCTTGAGAATTTCAGAGTTGCTTTCTTGAAAAATGCAACTGATGCCATGAAGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGAGTCACTGTCCTATAAAAAGCTGGACTTTGAAGAGTTTTGTGCCGCCGCAATCAGTGTATACCAGCTGGAAGTTCATCCAGAATGGGATAAAATTGCTACCACAGCTTTTGAGTATTTTGAGGAGACAGGAAACCGTGTCATTTCACTTGAGGAGTTAGCACAGGAGATGAATTTGGGTCCTTCCGCTTACTCTTTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTTCGTCGGATATACAAAGTTTTTGCATGGTGTCACAATTCGTAGTTCAAATACAAGACACCGACAGCTATGATGAGTCTAAAGGGAGATTTATTATTATTATTATTATNATCATTATATTATTTGTTGAAATTAGTTCGTGTTCTTTTTTTTCTTTCTTTTTAAATTTGAATTGAAAGGAAAACGGTATAGGGGGTCTAAGAATATTTTTTTTAGGGGGGGATTTGGGATTGGATCTTGGAAAAATAGAGCTAACATATTGTTTTATTCCTCACGTGATTTGCGGTTCAAAAGTAAAATCATCTCATTATACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00015	404388	411304	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000015s00000819.1	PF00069.20	Pkinase	144	392	2.30E-56

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.241
SRR1783600	control	10.162
SRR1783602	moderate drought stress	11.951
SRR1811619	moderate drought stress	11.780

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.366
DRR006520	Root Summer glycyrrhizin high producing strain	10.350
DRR006521	Root Winter glycyrrhizin high producing strain	10.787
DRR006522	Root Winter glycyrrhizin high producing strain	10.523
DRR006523	Root Summer glycyrrhizin low producing strain	15.311
DRR006524	Root Summer glycyrrhizin low producing strain	15.212
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.728
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.716

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.628
SRR2868004	Drought Stress (root)	25.607
SRR2967015	Control (root)	20.885

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.817
SRR9715740	Leaf	15.253
SRR9715741	Leaf	22.157
SRR9715739	Root	6.335
SRR9715742	Root	13.395
SRR9715743	Root	12.299

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.835
SRR8749028	MeJA induced 9h	38.722
SRR8749029	MeJA induced 9h	28.415
SRR8749030	Uninduced	42.865
SRR8749031	Uninduced	36.226
SRR8749032	Uninduced	27.775

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.434
SRR8400027	Control - Root	17.604