Gene detail information of Glyur000015s00000807 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007136451.1 | 2.65E-46 | hypothetical protein PHAVU_009G046400g [Phaseolus vulgaris] |
| trEMBL | tr|V7ASZ3|V7ASZ3_PHAVU | 1.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ESW08445.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 348531 | 349309 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000807.1 | PF14009.1 | DUF4228 | 1 | 88 | 9.30E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.471 |
| SRR1783600 | control | 2.310 |
| SRR1783602 | moderate drought stress | 1.618 |
| SRR1811619 | moderate drought stress | 1.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.999 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.005 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.530 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.928 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.671 |
| SRR2868004 | Drought Stress (root) | 50.952 |
| SRR2967015 | Control (root) | 41.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.572 |
| SRR9715740 | Leaf | 0.894 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 3.723 |
| SRR9715742 | Root | 3.842 |
| SRR9715743 | Root | 3.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.003 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.689 |
| SRR8400027 | Control - Root | 14.143 |