Gene detail information of Glyur000015s00000799.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03810.1 | 0 | O-fucosyltransferase family protein |
| NR | XP_004502749.1 | 0 | PREDICTED: uncharacterized protein LOC101510938 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 6.00E-45 | Uncharacterized protein At1g04910 |
| trEMBL | tr|I1JYI9|I1JYI9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 288995 | 295380 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000799.1 | PF10250.4 | O-FucT | 100 | 392 | 3.30E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.614 |
| SRR1783600 | control | 7.629 |
| SRR1783602 | moderate drought stress | 7.285 |
| SRR1811619 | moderate drought stress | 7.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.274 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.849 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.169 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.201 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.339 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.336 |
| SRR2868004 | Drought Stress (root) | 12.077 |
| SRR2967015 | Control (root) | 12.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.064 |
| SRR9715740 | Leaf | 16.751 |
| SRR9715741 | Leaf | 16.998 |
| SRR9715739 | Root | 2.190 |
| SRR9715742 | Root | 8.550 |
| SRR9715743 | Root | 7.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.569 |
| SRR8749028 | MeJA induced 9h | 12.291 |
| SRR8749029 | MeJA induced 9h | 7.025 |
| SRR8749030 | Uninduced | 8.751 |
| SRR8749031 | Uninduced | 4.756 |
| SRR8749032 | Uninduced | 4.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.031 |
| SRR8400027 | Control - Root | 12.175 |