Gene detail information of Glyur000015s00000795 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54165.1 | 2.00E-04 | |
| NR | KHN19558.1 | 5.42E-29 | hypothetical protein glysoja_027815 [Glycine soja] |
| trEMBL | tr|I1JYI6|I1JYI6_SOYBN | 2.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 278341 | 278715 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.237 |
| SRR1783600 | control | 20.832 |
| SRR1783602 | moderate drought stress | 24.017 |
| SRR1811619 | moderate drought stress | 23.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1086.060 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1088.851 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.943 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1361.383 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1360.098 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 571.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 567.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.932 |
| SRR2868004 | Drought Stress (root) | 119.712 |
| SRR2967015 | Control (root) | 542.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1550.291 |
| SRR9715740 | Leaf | 1447.323 |
| SRR9715741 | Leaf | 1655.472 |
| SRR9715739 | Root | 978.564 |
| SRR9715742 | Root | 1309.365 |
| SRR9715743 | Root | 1022.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 468.407 |
| SRR8749028 | MeJA induced 9h | 239.367 |
| SRR8749029 | MeJA induced 9h | 254.522 |
| SRR8749030 | Uninduced | 171.145 |
| SRR8749031 | Uninduced | 18.960 |
| SRR8749032 | Uninduced | 137.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 126.207 |
| SRR8400027 | Control - Root | 378.652 |