Gene detail information of Glyur000015s00000793 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64720.1 | 5.00E-136 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| NR | XP_003523319.1 | 0 | PREDICTED: uncharacterized protein LOC100785446 [Glycine max] |
| trEMBL | tr|I1JYI4|I1JYI4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 271895 | 274998 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.291 |
| SRR1783600 | control | 34.391 |
| SRR1783602 | moderate drought stress | 25.952 |
| SRR1811619 | moderate drought stress | 25.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 82.636 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 82.607 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 70.342 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.758 |
| SRR2868004 | Drought Stress (root) | 64.326 |
| SRR2967015 | Control (root) | 55.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 265.288 |
| SRR9715740 | Leaf | 180.585 |
| SRR9715741 | Leaf | 252.577 |
| SRR9715739 | Root | 109.493 |
| SRR9715742 | Root | 320.042 |
| SRR9715743 | Root | 275.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 109.462 |
| SRR8749028 | MeJA induced 9h | 88.831 |
| SRR8749029 | MeJA induced 9h | 56.848 |
| SRR8749030 | Uninduced | 253.385 |
| SRR8749031 | Uninduced | 46.815 |
| SRR8749032 | Uninduced | 74.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 74.178 |
| SRR8400027 | Control - Root | 87.916 |