Gene detail information of Glyur000015s00000779 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24530.1 | 5.00E-50 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_006578869.1 | 2.16E-78 | PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Glycine max] |
| COG | YP_007063996.1 | 2.00E-08 | flavanone 3-dioxygenase [Calothrix sp. PCC 7507] |
| Swissprot | tr|Q9LHN8|F6H1_ARATH | 9.00E-24 | Feruloyl CoA ortho-hydroxylase 1 |
| trEMBL | tr|I1JYH5|I1JYH5_SOYBN | 8.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40600.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 195461 | 207748 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000779.1 | PF14226.1 | DIOX_N | 38 | 137 | 2.50E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.074 |
| SRR1783600 | control | 1.993 |
| SRR1783602 | moderate drought stress | 1.852 |
| SRR1811619 | moderate drought stress | 1.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.166 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.111 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 239.326 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 230.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.511 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 54.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.117 |
| SRR2868004 | Drought Stress (root) | 6.190 |
| SRR2967015 | Control (root) | 5.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.797 |
| SRR9715740 | Leaf | 33.441 |
| SRR9715741 | Leaf | 39.585 |
| SRR9715739 | Root | 6.127 |
| SRR9715742 | Root | 6.518 |
| SRR9715743 | Root | 6.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.908 |
| SRR8749028 | MeJA induced 9h | 118.713 |
| SRR8749029 | MeJA induced 9h | 22.406 |
| SRR8749030 | Uninduced | 62.277 |
| SRR8749031 | Uninduced | 47.750 |
| SRR8749032 | Uninduced | 28.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.133 |
| SRR8400027 | Control - Root | 3.342 |