Gene detail information of Glyur000015s00000777 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27660.1 | 5.00E-34 | |
| NR | AFK38297.1 | 1.55E-72 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SDF5|I3SDF5_LOTJA | 6.00E-73 | Uncharacterized protein {ECO:0000313|EMBL:AFK38297.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 186237 | 187713 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.146 |
| SRR1783600 | control | 2.208 |
| SRR1783602 | moderate drought stress | 3.920 |
| SRR1811619 | moderate drought stress | 3.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.532 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.499 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.064 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.797 |
| SRR2868004 | Drought Stress (root) | 2.363 |
| SRR2967015 | Control (root) | 1.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.319 |
| SRR9715741 | Leaf | 0.298 |
| SRR9715739 | Root | 0.113 |
| SRR9715742 | Root | 1.091 |
| SRR9715743 | Root | 0.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.893 |
| SRR8749028 | MeJA induced 9h | 6.396 |
| SRR8749029 | MeJA induced 9h | 4.980 |
| SRR8749030 | Uninduced | 1.181 |
| SRR8749031 | Uninduced | 0.186 |
| SRR8749032 | Uninduced | 0.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.729 |
| SRR8400027 | Control - Root | 3.476 |