Gene detail information of Glyur000015s00000771 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11380.1 | 2.00E-05 | 1-deoxy-D-xylulose 5-phosphate synthase 3 |
| NR | XP_007137053.1 | 8.40E-08 | hypothetical protein PHAVU_009G095900g [Phaseolus vulgaris] |
| trEMBL | tr|V7ATQ4|V7ATQ4_PHAVU | 3.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:ESW09047.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 150712 | 152931 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.344 |
| SRR1783600 | control | 3.209 |
| SRR1783602 | moderate drought stress | 3.380 |
| SRR1811619 | moderate drought stress | 3.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.704 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.640 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.636 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.569 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.714 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.284 |
| SRR2868004 | Drought Stress (root) | 0.055 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.087 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.228 |
| SRR8749031 | Uninduced | 0.086 |
| SRR8749032 | Uninduced | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.060 |
| SRR8400027 | Control - Root | 0.158 |