Gene detail

Gene detail information of Glyur000015s00000770.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35580.2	1.00E-80	NAC transcription factor-like 9
NR	XP_004502779.1	0	PREDICTED: uncharacterized protein LOC101492664 [Cicer arietinum]
Swissprot	tr\|Q9FFI5\|NAC86_ARATH	4.00E-58	NAC domain-containing protein 86 {ECO:0000312\|EMBL:AED92405.1}
trEMBL	tr\|I1JYG1\|I1JYG1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G40450.1}

Sequence

Transcript Sequence

>Glyur000015s00000770.1
AGTCCCTGACACTTGCCTTCCGCTCAACGCTTCGTATAAACAGGAGACAACTGTGGCATTATCGTAGTTTCACAAAAAAACGCGGGTAAAACATCGCACACGGGATATACGAGGGATTTAAACACGGTTTCTCCATACGTAAAGTGCGAAAAACAAGTCACTACACTGTCACTGAAACTTTCTTTGTTCATGCGTGCGTGCNTGAGAAAAAAAATAGAAGAGATAGATAGAAAAAAGCTATGGGCCATCACACCCTTAAATCCTCTGAATTATTCCATTGATTCTCAGTTTCTTCTGCTTCGGATTATTATTTCTTTATATAATTGATCGAGGGTCCTTCTTTTCAAGGTTTCTCCTCTTTTTTTGTTGTGNTTGTGTTGTGATTGTGAATGGGTTCTGTTGACTGTTGTCCCNCGCATGGGGAAGAGATGGCGGTGCTGTCACTGAATTCGCTACCTTTAGGGTTCCGATTCCGGCCTACGGACGAGGAACTTATCAATTACTACCTGCGACAGAAGATCAACGGGAATGGTGACGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAACCCTGGGACATGCCCGATTTGTCTGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCAAACGGGCATCGATTGAACAGAGCAACGAGTCATGGGTATTGGAAGGCAACGGGCAAGGATCGCAAGATCAAGTCTGGGTCCAGCTTGATTGGGATGAAGAAGACTTTAGTTTTCTACAATGGTCGTGCACCCAAGGGGAAGAGGACCAATTGGGTTATGCACGAGTACCGCCCCACCCTGAAGGAGCTTGATGGTACCAACCCAGGACAGAATGCATATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGCCTTGAAGTTTCAAACTGTGAGGAAGTGGAGCAGACTACTTCAACTGCTCTGGCTGCCAATTACTCTCCAGAAGAAATACAGTCTGATCCAGCTTTTGTTGCAGTATGCCCGTCACAGGTCACAGAAGATGATAAGCACCAGACAGTTATCCCCGCGATCTCTGAGGAAACAATATCCAACATTATAACCCCAGTTGATTGCCTTGGTGATGGATACGATGCTCATGATGCTCAGAATCAAATTGTAAAACTAGCTGCAGAGGATGATCAGCTGCTGAACTTCGACATATATTATGACCCAAAAAATGANTTATTAGATGACAAATTTTTCTCCCCAGTACGTGTGCATATGCCGCCAGAACTTAATTATCAAGCAAACAATGAATCAGATGGTCGATGTGGTCTTCAATATGGTACAAATGAGATAAATATTTCAGACTTCTTAAATTCAGATGTGAATTGGGACCAAATCTCCTATGAGGAGTCCGGTACTCAACAGCAGAACTTCCCCTTGTTTAATGGTTCCGGCAGTGACTCAGATGTGGAAGTAGCCAAGATGAGCATGACTTATAAGCAAACTGCTTATCCTGAGGAGGCAATTGACAGAAGGATTCCTTCGGTGACAACACCAGAATTTTGCAGCACCATTGGCGTCACCTTTGACCATAGTGGTGATGATCATAAGAGCAATGTTGTATTATTACAAAATGATTCCCAGATGGCTTTTTCATCGCATGTTAATGTTGGCCAAGCGTACAACTACAATGTAGTCAATGATTATGGGCAACCAAGAGACTATAATGCAGTTATTAGTGGTGATAATGGAATCATAAGAAGGACTCGAGCGGCACAAAATGAGCTGCAGAGTACAAGCTTGAAGCAAGGTACTGCACACAGGAGAATTCGTTTGTCAAAAATTACACATGGCTCAAATGGGACGGTGAAAGATGGGAGTTGTGCACAAAAACAACATAATTCAAAACCAATCATTGCAGTGGAGAAGAAATCTGCAGAAAATCATGCTGCTGATGAAAGTGCTACTCGTACTAATTATGTGAATAAACTGCAGAAGACACCCGAGTCAATTGACAACAGAAAGATTTCTCAACAAGTTGCAAATGCAGGTTCCACCTTGGGGTTAAAAGACTTCTTATTTCTCAGGAGGGTGCTTCATATATCGAAATCAAAGGCTTCCTCCAATCGCACCATGTGGTCTTCTGTTTTTTTTGTAGTTTCTGCCTTTGTGCTGGTTTTATCAGTGGTCTTAACTAACATATGGGGATATCTTGAAGTTTAAACTGCTAGGAGATCATTCCTTTGTTTGTAGTTTGCCTCCATTTCTTTTTTGAGCCAGTTGAGGGGAGGCATGTAGGGTTGACTTTCTTAGATTTGTAATGTGTGTGTGCGTGCATATATATAGTTGGTGTATAATATGTATCCCCACGCGGTTGGCTAGTCTGTTGACTCTGTTGATGTAACATTAGATCAACCAGTTTCACGGTTTCACTATTTTCAATTTTTTCCCCAGCTCCACCTTTTGACTTTTGAGTTCGTTGTTTCTCCATTTCATATTAACACAAGGGATGAATACCTTGAACAATTATTAGGAAGACAAAAGGAAATATAACTTATATGCTGAATTATTGGATTGCATAAGAGTGTCTTGTATGTGATGAGTCATGTAACGTTTATCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00015	146132	150601	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000015s00000770.1	PF02365.10	NAM	22	148	6.80E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.959
SRR1783600	control	18.058
SRR1783602	moderate drought stress	16.314
SRR1811619	moderate drought stress	15.866

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	77.466
DRR006520	Root Summer glycyrrhizin high producing strain	76.131
DRR006521	Root Winter glycyrrhizin high producing strain	8.514
DRR006522	Root Winter glycyrrhizin high producing strain	8.284
DRR006523	Root Summer glycyrrhizin low producing strain	144.690
DRR006524	Root Summer glycyrrhizin low producing strain	144.455
DRR006525	Leaf Summer glycyrrhizin high producing strain	30.090
DRR006526	Leaf Summer glycyrrhizin high producing strain	30.406

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.841
SRR2868004	Drought Stress (root)	33.297
SRR2967015	Control (root)	37.132

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	270.101
SRR9715740	Leaf	111.744
SRR9715741	Leaf	289.783
SRR9715739	Root	40.990
SRR9715742	Root	202.736
SRR9715743	Root	179.986

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	86.651
SRR8749028	MeJA induced 9h	127.687
SRR8749029	MeJA induced 9h	82.866
SRR8749030	Uninduced	49.733
SRR8749031	Uninduced	24.309
SRR8749032	Uninduced	27.543

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.906
SRR8400027	Control - Root	42.413