Gene detail information of Glyur000015s00000766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27585.1 | 2.00E-146 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| NR | XP_007136367.1 | 0 | hypothetical protein PHAVU_009G039300g [Phaseolus vulgaris] |
| COG | YP_001938005.1 | 9.00E-118 | hypothetical protein OTT_1313 [Orientia tsutsugamushi str. Ikeda] |
| Swissprot | tr|Q9FM19|HIR1_ARATH | 7.00E-08 | Hypersensitive-induced response protein 1 |
| trEMBL | tr|I1JYF7|I1JYF7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G40420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 123612 | 129227 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000766.1 | PF01145.20 | Band_7 | 68 | 239 | 7.90E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.442 |
| SRR1783600 | control | 24.600 |
| SRR1783602 | moderate drought stress | 18.202 |
| SRR1811619 | moderate drought stress | 18.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.817 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.314 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.451 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.759 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.341 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.943 |
| SRR2868004 | Drought Stress (root) | 21.208 |
| SRR2967015 | Control (root) | 19.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.921 |
| SRR9715740 | Leaf | 16.339 |
| SRR9715741 | Leaf | 10.716 |
| SRR9715739 | Root | 6.061 |
| SRR9715742 | Root | 13.868 |
| SRR9715743 | Root | 12.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.268 |
| SRR8749028 | MeJA induced 9h | 37.551 |
| SRR8749029 | MeJA induced 9h | 47.722 |
| SRR8749030 | Uninduced | 11.649 |
| SRR8749031 | Uninduced | 8.398 |
| SRR8749032 | Uninduced | 8.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.956 |
| SRR8400027 | Control - Root | 24.603 |