Gene detail information of Glyur000015s00000762 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18000.1 | 1.00E-141 | Major facilitator superfamily protein |
| NR | XP_003602430.1 | 0 | UNC93-like protein C922.05c [Medicago truncatula] |
| Swissprot | tr|Q8LG53|UN932_ARATH | 0 | UNC93-like protein 2 |
| trEMBL | tr|G7J9N9|G7J9N9_MEDTR | 0 | MFS transporter {ECO:0000313|EMBL:AES72681.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 113132 | 116090 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000762.1 | PF05978.11 | UNC-93 | 56 | 177 | 6.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.907 |
| SRR1783600 | control | 0.872 |
| SRR1783602 | moderate drought stress | 1.542 |
| SRR1811619 | moderate drought stress | 1.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.641 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.625 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.480 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.436 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.393 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.800 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.851 |
| SRR2868004 | Drought Stress (root) | 10.965 |
| SRR2967015 | Control (root) | 11.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.891 |
| SRR9715740 | Leaf | 5.491 |
| SRR9715741 | Leaf | 7.665 |
| SRR9715739 | Root | 1.213 |
| SRR9715742 | Root | 2.269 |
| SRR9715743 | Root | 2.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.324 |
| SRR8749028 | MeJA induced 9h | 14.472 |
| SRR8749029 | MeJA induced 9h | 9.509 |
| SRR8749030 | Uninduced | 11.103 |
| SRR8749031 | Uninduced | 3.141 |
| SRR8749032 | Uninduced | 5.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.815 |
| SRR8400027 | Control - Root | 3.231 |