Gene detail information of Glyur000015s00000761 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24610.1 | 3.00E-59 | |
| NR | NP_001236927.1 | 4.67E-92 | uncharacterized protein LOC100527500 [Glycine max] |
| trEMBL | tr|C6T4I6|C6T4I6_SOYBN | 2.00E-92 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16596.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 104215 | 104658 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.290 |
| SRR1783600 | control | 6.525 |
| SRR1783602 | moderate drought stress | 9.083 |
| SRR1811619 | moderate drought stress | 9.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.152 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.855 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.559 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.871 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.435 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.864 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.105 |
| SRR2868004 | Drought Stress (root) | 48.566 |
| SRR2967015 | Control (root) | 75.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.715 |
| SRR9715740 | Leaf | 32.633 |
| SRR9715741 | Leaf | 59.280 |
| SRR9715739 | Root | 13.412 |
| SRR9715742 | Root | 19.041 |
| SRR9715743 | Root | 19.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.992 |
| SRR8749028 | MeJA induced 9h | 13.972 |
| SRR8749029 | MeJA induced 9h | 9.671 |
| SRR8749030 | Uninduced | 3.317 |
| SRR8749031 | Uninduced | 0.886 |
| SRR8749032 | Uninduced | 2.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.474 |
| SRR8400027 | Control - Root | 30.938 |