Gene detail information of Glyur000015s00000759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24630.5 | 1.00E-52 | double-stranded DNA binding |
| NR | XP_004502788.1 | 0 | PREDICTED: DNA-binding protein BIN4-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9FLU1|BIN4_ARATH | 1.00E-62 | DNA-binding protein BIN4 |
| trEMBL | tr|V7ASS2|V7ASS2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 96287 | 101018 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.328 |
| SRR1783600 | control | 5.150 |
| SRR1783602 | moderate drought stress | 6.000 |
| SRR1811619 | moderate drought stress | 5.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.595 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.880 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.744 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.962 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.947 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.365 |
| SRR2868004 | Drought Stress (root) | 6.470 |
| SRR2967015 | Control (root) | 6.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.972 |
| SRR9715740 | Leaf | 1.683 |
| SRR9715741 | Leaf | 2.217 |
| SRR9715739 | Root | 0.578 |
| SRR9715742 | Root | 2.517 |
| SRR9715743 | Root | 2.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.297 |
| SRR8749028 | MeJA induced 9h | 16.973 |
| SRR8749029 | MeJA induced 9h | 18.413 |
| SRR8749030 | Uninduced | 5.431 |
| SRR8749031 | Uninduced | 2.779 |
| SRR8749032 | Uninduced | 3.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.186 |
| SRR8400027 | Control - Root | 9.140 |