Gene detail information of Glyur000015s00000757 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24660.1 | 1.00E-13 | response to low sulfur 2 |
| NR | XP_004502790.1 | 2.01E-50 | PREDICTED: DNA double-strand break repair Rad50 ATPase-like [Cicer arietinum] |
| trEMBL | tr|G7J9Q1|G7J9Q1_MEDTR | 4.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:AFK49288.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 82796 | 83116 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.383 |
| SRR1783600 | control | 29.009 |
| SRR1783602 | moderate drought stress | 138.004 |
| SRR1811619 | moderate drought stress | 136.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 157.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 150.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.245 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.124 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 256.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 252.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.891 |
| SRR2868004 | Drought Stress (root) | 56.979 |
| SRR2967015 | Control (root) | 24.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 290.536 |
| SRR9715740 | Leaf | 379.744 |
| SRR9715741 | Leaf | 205.387 |
| SRR9715739 | Root | 51.955 |
| SRR9715742 | Root | 49.448 |
| SRR9715743 | Root | 42.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.775 |
| SRR8749028 | MeJA induced 9h | 37.215 |
| SRR8749029 | MeJA induced 9h | 73.137 |
| SRR8749030 | Uninduced | 84.243 |
| SRR8749031 | Uninduced | 68.205 |
| SRR8749032 | Uninduced | 68.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.314 |
| SRR8400027 | Control - Root | 50.854 |