Gene detail information of Glyur000015s00000756 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24680.1 | 1.00E-85 | Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 |
| NR | XP_004502791.1 | 0 | PREDICTED: zinc finger with UFM1-specific peptidase domain protein-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072V1C7|A0A072V1C7_MEDTR | 0 | Zinc finger with UFM1-specific peptidase domain protein {ECO:0000313|EMBL:KEH35496.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 75247 | 80664 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000756.1 | PF07910.8 | Peptidase_C78 | 39 | 287 | 8.60E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.240 |
| SRR1783600 | control | 3.194 |
| SRR1783602 | moderate drought stress | 7.715 |
| SRR1811619 | moderate drought stress | 7.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.433 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.362 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.406 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.179 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.099 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.425 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.615 |
| SRR2868004 | Drought Stress (root) | 18.723 |
| SRR2967015 | Control (root) | 18.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.171 |
| SRR9715740 | Leaf | 6.128 |
| SRR9715741 | Leaf | 5.213 |
| SRR9715739 | Root | 0.061 |
| SRR9715742 | Root | 1.213 |
| SRR9715743 | Root | 0.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.450 |
| SRR8749028 | MeJA induced 9h | 16.518 |
| SRR8749029 | MeJA induced 9h | 6.780 |
| SRR8749030 | Uninduced | 13.284 |
| SRR8749031 | Uninduced | 12.846 |
| SRR8749032 | Uninduced | 8.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.483 |
| SRR8400027 | Control - Root | 6.432 |