Gene detail

Gene detail information of Glyur000015s00000748

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G19985.1	6.00E-45	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	XP_003602454.1	1.58E-99	N-acetyltransferase, putative [Medicago truncatula]
trEMBL	tr\|G7J9R3\|G7J9R3_MEDTR	6.00E-100	Acetyltransferase (GNAT) domain protein {ECO:0000313\|EMBL:AES72705.1}

Sequence

Transcript Sequence

>Glyur000015s00000748.1
ATGGTGGCAACGGGAGTTGCAGCAGCTCACNCATACGTACAGTTAGAAAAACACTCCTACATGATGATAAAGGGTGGTTTGGGATCAAAATGGATGGAACTGAAATGGGTAAGGAGAAGAAGAATCAGCAGGAACAACTCACAAGTACTAGAGGAGGAGGAGAAGCCGTTAAGGAGACCACTTTTGCCGGTTTACATTTCCACCGNCCCACGCCACGTCGATCCTCAACATCTCCGAGACCTCTGCGCCACTTGCAACCACTCTTGCCACCGATTCCCAAACCTCCTCNCCGAACCCGAACCAGTGGATATTCACAAGCTCCGCATTGCTCTGTCTCACAGTGCTGTCCTTGTCTCTGTCTTCTGCAAACCCCACCACGTTCTCTCCGATGACGCTTTCGCCAACAANTCTTCATCATCTTCTTCCATCATGGCTGTGACGGATTTCTTCACGCCGGTCTCTCCTTCCCGGGACCAATTGGTGGGCTTTGGCCGTGCCGTTATTCCATCCCTGCGAAGAATGGGAATTGGAAAGATGATTGTTAAAAAAATNGTGAGAATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGCTCAGAGGATGAGAGGTTATTTTTTAAGGCGTGTGGATTTGGAGGTGACATTTTGGGCTCTACTACCATGATGTACACTAGAAGTGCTTCATCAACAAGCCAAGAAGGTGAACAAACCGTTACACGTGCAGGCCGAAAGCTATTGTTGGTTCCACCTCTCATTGAGAGACCCTAAAAATCATCAAGGACAAATATAATATAGAGTCAAGCTTCACTGTATAAACAGCAAGAAAAACAAGATTGTTGTCTGATCAACCAGAAGAGNTTCAACGTTTCCATTTTTCTAGTCATTCTTGGCAGGTGTAAATTCAACNGAGCAAGGAAAATGTCTAGTTGCAAGATTCTTTTGCCATGCATTTACTGTAAATGTGAAGTNTTGTGGCTTCTGGAACTGGAAGAATCGAGTCTTGTATATAATTATTAAACTCATATTTTTGTCATTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00015	30630	32861	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000015s00000748.1	PF00583.19	Acetyltransf_1	163	213	0.0002

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.631
SRR1783600	control	1.542
SRR1783602	moderate drought stress	1.640
SRR1811619	moderate drought stress	1.476

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.285
DRR006520	Root Summer glycyrrhizin high producing strain	2.050
DRR006521	Root Winter glycyrrhizin high producing strain	1.497
DRR006522	Root Winter glycyrrhizin high producing strain	1.407
DRR006523	Root Summer glycyrrhizin low producing strain	1.675
DRR006524	Root Summer glycyrrhizin low producing strain	1.675
DRR006525	Leaf Summer glycyrrhizin high producing strain	58.794
DRR006526	Leaf Summer glycyrrhizin high producing strain	61.557

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.329
SRR2868004	Drought Stress (root)	1.706
SRR2967015	Control (root)	0.693

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	22.856
SRR9715740	Leaf	27.408
SRR9715741	Leaf	17.172
SRR9715739	Root	0.184
SRR9715742	Root	0.633
SRR9715743	Root	0.804

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.914
SRR8749028	MeJA induced 9h	0.784
SRR8749029	MeJA induced 9h	0.263
SRR8749030	Uninduced	0.015
SRR8749031	Uninduced	0.001
SRR8749032	Uninduced	0.054

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.229
SRR8400027	Control - Root	2.617