Gene detail information of Glyur000015s00000744 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10840.1 | 6.00E-124 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_007136394.1 | 0 | hypothetical protein PHAVU_009G041500g [Phaseolus vulgaris] |
| COG | YP_004174602.1 | 4.00E-51 | hypothetical protein ANT_19760 [Anaerolinea thermophila UNI-1] |
| trEMBL | tr|V7AS48|V7AS48_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08389.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 24194 | 28656 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000744.1 | PF12697.2 | Abhydrolase_6 | 147 | 464 | 2.50E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.932 |
| SRR1783600 | control | 4.905 |
| SRR1783602 | moderate drought stress | 5.027 |
| SRR1811619 | moderate drought stress | 5.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.984 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.786 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.116 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.988 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.331 |
| SRR2868004 | Drought Stress (root) | 10.676 |
| SRR2967015 | Control (root) | 12.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.018 |
| SRR9715740 | Leaf | 38.839 |
| SRR9715741 | Leaf | 23.669 |
| SRR9715739 | Root | 1.004 |
| SRR9715742 | Root | 3.573 |
| SRR9715743 | Root | 2.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.970 |
| SRR8749028 | MeJA induced 9h | 4.626 |
| SRR8749029 | MeJA induced 9h | 1.882 |
| SRR8749030 | Uninduced | 1.977 |
| SRR8749031 | Uninduced | 4.882 |
| SRR8749032 | Uninduced | 3.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.109 |
| SRR8400027 | Control - Root | 8.205 |