Gene detail information of Glyur000014s00002589 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13040.1 | 2.00E-09 | Integrase-type DNA-binding superfamily protein |
| NR | AFK48105.1 | 3.88E-83 | unknown [Lotus japonicus] |
| Swissprot | tr|Q56XP9|ERFL1_ARATH | 1.00E-20 | Ethylene-responsive transcription factor-like protein At4g13040 |
| trEMBL | tr|I3T6G3|I3T6G3_LOTJA | 1.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:AFK48105.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 665422 | 670908 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.229 |
| SRR1783600 | control | 3.016 |
| SRR1783602 | moderate drought stress | 2.557 |
| SRR1811619 | moderate drought stress | 2.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.938 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.093 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.223 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.466 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.983 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.484 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.742 |
| SRR2868004 | Drought Stress (root) | 20.986 |
| SRR2967015 | Control (root) | 13.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.721 |
| SRR9715740 | Leaf | 26.065 |
| SRR9715741 | Leaf | 24.459 |
| SRR9715739 | Root | 1.876 |
| SRR9715742 | Root | 4.677 |
| SRR9715743 | Root | 5.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.366 |
| SRR8749028 | MeJA induced 9h | 7.593 |
| SRR8749029 | MeJA induced 9h | 13.086 |
| SRR8749030 | Uninduced | 19.596 |
| SRR8749031 | Uninduced | 14.389 |
| SRR8749032 | Uninduced | 15.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.996 |
| SRR8400027 | Control - Root | 9.099 |