Gene detail information of Glyur000014s00002576 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06340.1 | 2.00E-26 | Plant Tudor-like protein |
| NR | XP_007159047.1 | 1.09E-51 | hypothetical protein PHAVU_002G204200g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQ24|V7CQ24_PHAVU | 4.00E-52 | Uncharacterized protein {ECO:0000313|EMBL:ESW31041.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 531467 | 531910 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002576.1 | PF05641.7 | Agenet | 10 | 76 | 1.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 64.013 |
| SRR1783600 | control | 63.976 |
| SRR1783602 | moderate drought stress | 65.468 |
| SRR1811619 | moderate drought stress | 66.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.803 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.177 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 243.604 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 233.613 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 177.785 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 179.504 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.579 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.589 |
| SRR2868004 | Drought Stress (root) | 34.727 |
| SRR2967015 | Control (root) | 21.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.875 |
| SRR9715740 | Leaf | 15.086 |
| SRR9715741 | Leaf | 6.861 |
| SRR9715739 | Root | 60.554 |
| SRR9715742 | Root | 25.188 |
| SRR9715743 | Root | 24.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 360.553 |
| SRR8749028 | MeJA induced 9h | 227.306 |
| SRR8749029 | MeJA induced 9h | 668.172 |
| SRR8749030 | Uninduced | 234.493 |
| SRR8749031 | Uninduced | 183.840 |
| SRR8749032 | Uninduced | 431.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.529 |
| SRR8400027 | Control - Root | 25.225 |