Gene detail information of Glyur000014s00002575 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42590.2 | 6.00E-125 | general regulatory factor 9 |
| NR | XP_004487160.1 | 1.72E-176 | PREDICTED: 14-3-3-like protein B-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q96453|1433D_SOYBN | 2.00E-176 | 14-3-3-like protein D |
| trEMBL | tr|E1U3Z1|E1U3Z1_CICAR | 6.00E-177 | 14-3-3 {ECO:0000313|EMBL:ACQ45020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 522384 | 525949 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002575.1 | PF00244.15 | 2014/3/3 | 7 | 241 | 2.50E-115 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.078 |
| SRR1783600 | control | 25.456 |
| SRR1783602 | moderate drought stress | 11.766 |
| SRR1811619 | moderate drought stress | 11.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.546 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.671 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.411 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.153 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 54.801 |
| SRR2868004 | Drought Stress (root) | 44.622 |
| SRR2967015 | Control (root) | 38.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.741 |
| SRR9715740 | Leaf | 6.107 |
| SRR9715741 | Leaf | 7.942 |
| SRR9715739 | Root | 25.880 |
| SRR9715742 | Root | 25.385 |
| SRR9715743 | Root | 27.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.513 |
| SRR8749028 | MeJA induced 9h | 6.406 |
| SRR8749029 | MeJA induced 9h | 5.372 |
| SRR8749030 | Uninduced | 2.284 |
| SRR8749031 | Uninduced | 1.852 |
| SRR8749032 | Uninduced | 0.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.065 |
| SRR8400027 | Control - Root | 64.513 |