Gene detail

Gene detail information of Glyur000014s00002569

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G23360.1	4.00E-07	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	XP_004505506.1	0	PREDICTED: uncharacterized protein LOC101513404 [Cicer arietinum]
COG	YP_007072117.1	6.00E-89	type 11 methyltransferase [Leptolyngbya sp. PCC 7376]
trEMBL	tr\|I1LSB3\|I1LSB3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G14360.1}

Sequence

Transcript Sequence

>Glyur000014s00002569.1
TTTGGAGCATGATTGATAGATCGATACATTTCAAAGATTTTATTTTTATTTTTTTAACTCCACGTGGCGAGATACTATTGGTCAGAGAGATTTAGTGGCGATGCTCTTAGGATGTCTTCGTGGTTTGCCACAGTTTGTCCCATTTTCAGAATGGCTCTGTCGTCACCACTTCAGCACCTCTCTGCAGTAACCTCTGCGCATGGCAATACCACCACCGCAACGGCGAAGGCACCAAGAGCCGCAGCAAGATGGCGGCCCTGGGCTGTTCACGCGGCGGCGTCCGACATTCAAGTGGGTGGTTATGAAGAAGGAAACTTGGTGCGACCCAGATGGACCGGAGAGACCCCNCTCTCTCGCTTGGTTCGAGCTCTTATCTCCTTCAAGCCCTTATACTCTGTCCTCAAGCTTGGTGCTAGACAGGTTTTAATAAGTACAGCTGAGAAGAACAACATACCTTGGAGGGAAATGGCGAAAGAGATTTTAGAGTCAGAAGTGCACAGGGAGCTGGACAGCATTCAAAACCACTCTTTAGTATACCCGGATTATTATTTGAATCCATTTCATGCATATGACGAGGGAAATCTTACATGGCTGGCAGCAGCAGAAGCAGAGGCTGCTACGATGTCAATGGTGAGACGAGCAATTCCAGATGCTGCTTCAGTAGACGAAGCAAATCAGATACTGCGTGGCAATTGGCTTCGCGCAATTGAACAACACCATTTACAGCATTCACAAACATCCATGATTGGTGACATCCTAGATATTGGATGCTCTGTAGGAGTAAGCTCAAGATATCTTGCAGACAAGTTCCCTACAGCCAAAGTCACCGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCCCAGCACAAGGAAAAGAGAGGAACTCCTAGAAAAAATCCTATAAAATGGATACATGCAAATGGGGAAGACACAGGCTTGTCTTCTAAATCATTTGACCTTGTGTCTATTGCTTATGTGCTCCATGAATGTCCTACAAGAGCTATAGTGAATTTAGTAAAGGAAGCATTCCGTCTCCTTCGACCTGGAGGCACACTAGCTTTGACAGATAATTCGCCAAAGTCGAAGGTCCTACAGGAATTGTCTCCGGTCCTGTTTACATTGATGAAGAGCACAGAACCCTTTCTTGATGAGTACTACTTGACTGATATGGACGAAGCACTGAGGNAGGTTGGTTTTGTGAACATAACATCAATTCTTACAGACCCGAGGCACGTGACAATAACAGCTACTGTGCCTCAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00014	504962	508733	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000014s00002569.1	PF08241.7	Methyltransf_11	216	317	3.30E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.262
SRR1783600	control	2.169
SRR1783602	moderate drought stress	3.193
SRR1811619	moderate drought stress	3.176

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.655
DRR006520	Root Summer glycyrrhizin high producing strain	2.548
DRR006521	Root Winter glycyrrhizin high producing strain	3.074
DRR006522	Root Winter glycyrrhizin high producing strain	3.035
DRR006523	Root Summer glycyrrhizin low producing strain	4.814
DRR006524	Root Summer glycyrrhizin low producing strain	5.041
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.727
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.030

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.319
SRR2868004	Drought Stress (root)	10.446
SRR2967015	Control (root)	8.669

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	66.476
SRR9715740	Leaf	68.511
SRR9715741	Leaf	56.998
SRR9715739	Root	2.640
SRR9715742	Root	4.245
SRR9715743	Root	3.513

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.577
SRR8749028	MeJA induced 9h	13.778
SRR8749029	MeJA induced 9h	14.541
SRR8749030	Uninduced	9.306
SRR8749031	Uninduced	3.961
SRR8749032	Uninduced	8.902

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.896
SRR8400027	Control - Root	7.654