Gene detail information of Glyur000014s00002543.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28520.2 | 5.00E-125 | vascular plant one zinc finger protein |
| NR | XP_004505529.1 | 0 | PREDICTED: transcription factor VOZ1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SGQ0|VOZ1_ARATH | 7.00E-156 | Transcription factor VOZ1 |
| trEMBL | tr|K7KXY5|K7KXY5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G43890.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 369164 | 375758 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | VOZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002543.1 | PF07047.7 | OPA3 | 5 | 129 | 1.40E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.139 |
| SRR1783600 | control | 22.486 |
| SRR1783602 | moderate drought stress | 17.385 |
| SRR1811619 | moderate drought stress | 17.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.303 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.064 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.528 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.180 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.043 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.098 |
| SRR2868004 | Drought Stress (root) | 19.571 |
| SRR2967015 | Control (root) | 18.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.383 |
| SRR9715740 | Leaf | 12.826 |
| SRR9715741 | Leaf | 11.931 |
| SRR9715739 | Root | 3.837 |
| SRR9715742 | Root | 9.028 |
| SRR9715743 | Root | 8.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.728 |
| SRR8749028 | MeJA induced 9h | 19.646 |
| SRR8749029 | MeJA induced 9h | 15.744 |
| SRR8749030 | Uninduced | 9.964 |
| SRR8749031 | Uninduced | 12.223 |
| SRR8749032 | Uninduced | 8.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.761 |
| SRR8400027 | Control - Root | 20.442 |