Gene detail information of Glyur000014s00002539 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54680.1 | 3.00E-09 | proteophosphoglycan-related |
| NR | KGN43479.1 | 7.50E-33 | hypothetical protein Csa_7G039270 [Cucumis sativus] |
| trEMBL | tr|K7LW50|K7LW50_SOYBN | 2.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33536.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 354155 | 354799 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.805 |
| SRR1783600 | control | 23.153 |
| SRR1783602 | moderate drought stress | 25.953 |
| SRR1811619 | moderate drought stress | 25.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.240 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.029 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.353 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.017 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.625 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.503 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.802 |
| SRR2868004 | Drought Stress (root) | 6.499 |
| SRR2967015 | Control (root) | 7.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.783 |
| SRR9715740 | Leaf | 9.942 |
| SRR9715741 | Leaf | 9.291 |
| SRR9715739 | Root | 14.487 |
| SRR9715742 | Root | 10.902 |
| SRR9715743 | Root | 11.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.776 |
| SRR8749028 | MeJA induced 9h | 7.969 |
| SRR8749029 | MeJA induced 9h | 9.001 |
| SRR8749030 | Uninduced | 1.983 |
| SRR8749031 | Uninduced | 3.064 |
| SRR8749032 | Uninduced | 2.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.548 |
| SRR8400027 | Control - Root | 10.934 |